Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5142 122 2e-22
seq2634 122 2e-22
seq19449 114 3e-20
seq8650 114 3e-20
seq7966 114 3e-20
seq695 113 1e-19
seq10902 109 1e-18
seq27424 105 2e-17
seq6254 93.3 1e-13
seq567 93.3 1e-13
seq15966 91.5 3e-13
seq9420 91.5 3e-13
seq1871 91.5 3e-13
seq16244 89.7 1e-12
>seq5142
Length=12213
Score = 122 bits (134), Expect = 2e-22
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| ||||||||| || || ||||| || |||||||||||
Sbjct 7174 CGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 7233
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| |||||| ||||| ||||| |||||||| || |||||||| ||||| | |
Sbjct 7234 GTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACAAAAATC 7293
Query 211110 TGCAT 211114
|||||
Sbjct 7294 TGCAT 7298
Score = 116 bits (128), Expect = 9e-21
Identities = 178/265 (67%), Gaps = 43/265 (16%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 6766 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 6825
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT--------------------------- 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 6826 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGATCTAAACATTGAACTTGAGAATTAAACA 6885
Query 210986 -----------AAGGC-----GTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029
||| | |||| || |||||||| | |||||| |||||||| ||||
Sbjct 6886 AATGGAAAATAAAGACCAATCGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCT 6945
Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089
| || |||||||| ||||| ||||| ||| || || |||||||| ||||||||||
Sbjct 6946 TGGCCTTGACGTTTTCAATGGTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCG 7005
Query 211090 TGAGAGTCTTTACAAACACCTGCAT 211114
|||| ||||| ||||| ||||||
Sbjct 7006 TGAGGGTCTTCACAAAGGTCTGCAT 7030
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 7445 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 7504
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 7505 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 7564
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 7565 TGCATATT 7572
>seq2634
Length=16880
Score = 122 bits (134), Expect = 2e-22
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| ||||||||| || || ||||| || |||||||||||
Sbjct 1634 CGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 1693
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| |||||| ||||| ||||| |||||||| || |||||||| ||||| | |
Sbjct 1694 GTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACAAAAATC 1753
Query 211110 TGCAT 211114
|||||
Sbjct 1754 TGCAT 1758
Score = 118 bits (130), Expect = 2e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| |||||| |||||||| ||||| || ||||| || |||
Sbjct 1366 CGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATG 1425
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| ||| || || |||||||| |||||||||||||| ||||| ||||| | |
Sbjct 1426 GTATCAGACGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 1485
Query 211110 TGCAT 211114
|||||
Sbjct 1486 TGCAT 1490
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 1905 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 1964
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 1965 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 2024
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 2025 TGCATATT 2032
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 1090 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 1149
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 1150 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 1209
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 1210 ATTTGCATT 1218
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 1224 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 1283
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 1284 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 1316
>seq19449
Length=4096
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| |||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 998 CCATCCTCCAACTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 939
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || || ||||||||||| || || || || | |||
Sbjct 938 TTCTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 879
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 878 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 841
>seq8650
Length=8768
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 4663 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 4604
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 4603 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 4544
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 4543 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 4506
Score = 89.7 bits (98), Expect = 1e-12
Identities = 98/129 (76%), Gaps = 1/129 (1%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG-TCAGGAGGAACTCCTTC 211015
||||| |||| ||||| ||||||||||| || ||||| ||| || || || | || ||
Sbjct 5043 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGGCTCCGGGGGGATCCCCTC 4984
Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075
||| ||||||||||| || || |||||||||||||| || || || || | ||
Sbjct 4983 CTTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGT 4924
Query 211076 GATCGTCTT 211084
|||||||||
Sbjct 4923 GATCGTCTT 4915
>seq7966
Length=9287
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 5180 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 5239
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 5240 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 5299
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 5300 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 5337
>seq695
Length=26773
Score = 113 bits (124), Expect = 1e-19
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || ||||| |||| ||||||||| || || ||||| || |||||||||||
Sbjct 12452 CGTTGCTGATCAGGCGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 12393
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| ||||| ||||||||||| |||||||| || |||||||| || || | |
Sbjct 12392 GTGTCAGAAGCCTCAACTTCGAGAGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAAATC 12333
Query 211110 TGCAT 211114
|||||
Sbjct 12332 TGCAT 12328
Score = 113 bits (124), Expect = 1e-19
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| |||||| |||||||| ||||| || ||||| || |||
Sbjct 12723 CGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATG 12664
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| ||| || || || ||||| |||||||||||||| ||||| ||||| | |
Sbjct 12663 GTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 12604
Query 211110 TGCAT 211114
|||||
Sbjct 12603 TGCAT 12599
Score = 109 bits (120), Expect = 1e-18
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 12181 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 12122
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || ||||||||||| || | |
Sbjct 12121 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTTACGAAGATC 12062
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 12061 TGCATATT 12054
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 12999 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 12940
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 12939 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAG 12880
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 12879 ATTTGCATT 12871
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 12865 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 12806
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 12805 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 12773
>seq10902
Length=7311
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| || || ||||||||||| || ||||| || || || || | || |||
Sbjct 5955 CCATCCTCCAATTGTTTCCCTGCGAAGATTAGACGTTGCTGCTCCGGGGGGATCCCCTCC 5896
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 5895 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 5836
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 5835 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 5798
>seq27424
Length=2520
Score = 105 bits (116), Expect = 2e-17
Identities = 120/160 (75%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCA--GGAGGAACTCCTT 211014
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |
Sbjct 394 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCCGGGGGGGATCCCCT 453
Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074
|||| ||||||||||| || || |||||||||||||| || || || || | |
Sbjct 454 CCTTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGG 513
Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||| || ||||| || || ||||| || |||||
Sbjct 514 TGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 553
>seq6254
Length=10896
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 10589 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 10648
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 10649 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAG 10708
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 10709 ATTTGCATT 10717
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 10723 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 10782
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 10783 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 10815
>seq567
Length=28520
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || ||||| |||| || ||||||||||| ||||| |||||| || ||
Sbjct 6920 AGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTCTCA 6861
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| || || ||| ||| || || ||||| || ||||||||||| || ||||| |||||
Sbjct 6860 ATAGTATCCGAGGCTTCCACTTCCAGAGTAATAGTCTTTCCCGTAAGTGTCTTAACAAAA 6801
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 6800 ATTTGCATT 6792
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || ||||| || || | ||||||||||| || || || || || ||||| ||
Sbjct 6640 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATT 6581
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
||||||||| |||||| || |||||||| |||||||| || | |||||||| || | |
Sbjct 6580 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 6521
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 6520 TGCATATT 6513
>seq15966
Length=5121
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 929 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 870
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 869 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 810
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 809 TGCATATT 802
>seq9420
Length=8200
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 7156 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 7215
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 7216 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 7275
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 7276 TGCATATT 7283
>seq1871
Length=19151
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 11592 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 11533
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 11532 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 11473
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 11472 TGCATATT 11465
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| || ||||| ||||||||||||||||| || | |||
Sbjct 11735 ACGAAGACGTAAAACTAAGTGAAGTGTAGACTCCTTTTGGATGTTATAATCAGCCAAGGT 11676
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| ||||||||| || |||||||| || |||||
Sbjct 11675 TCGTCCATCTTCAAGTTGCTTGCCAGCAAAGAT 11643
>seq16244
Length=5026
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 261 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 202
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || | | ||| || || ||
Sbjct 201 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCATTCAAAGTTTTCACGAAG 142
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 141 ATTTGCATT 133
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 127 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 68
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 67 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158686534907465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |