Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3049 140 5e-28 seq2786 132 7e-26 seq27688 122 1e-22 seq13787 113 6e-20 seq1624 113 6e-20 seq20812 104 3e-17 seq16867 98.7 1e-15 seq9293 98.7 1e-15 seq490 98.7 1e-15 seq30683 96.9 5e-15 seq8535 86.0 9e-12 >seq3049 Length=15854 Score = 140 bits (154), Expect = 5e-28 Identities = 295/445 (66%), Gaps = 44/445 (10%) Strand=Plus/Plus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||||| || | |||||| |||||||| | |||||| |||||||| | | |||||| Sbjct 13762 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 13821 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| || Sbjct 13822 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 13881 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 ||| |||||| |||||||| || || || || ||||| || |||| | || || | Sbjct 13882 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACC--A 13939 Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356 | || ||||| || | | |||| || | ||||||||||| || ||||| | | || Sbjct 13940 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 13999 Query 48357 GGCATTGTTTCTATAGCATTAAA---------------GAGAAAGttttt---------- 48391 | |||||||||||| | ||| ||||| Sbjct 14000 TCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAG 14059 Query 48392 ------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439 |||| | |||||||| |||||||| ||||| ||||||||| Sbjct 14060 AAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTC 14119 Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499 || |||||||||||||| || || |||||||| |||||||| | ||||||| || || Sbjct 14120 TGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTG 14179 Query 48500 TACCTCCGTACAAAATCGTTCAGCC 48524 || || | ||| |||||| || Sbjct 14180 AACTTCTTGAGCAAAACGTTCAACC 14204 >seq2786 Length=16508 Score = 132 bits (146), Expect = 7e-26 Identities = 297/451 (66%), Gaps = 50/451 (11%) Strand=Plus/Plus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||||| || | |||||| |||||||| | |||||| |||||||||| | |||||| Sbjct 4156 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 4215 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| || Sbjct 4216 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 4275 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 ||| ||||||||||||||| || || || || ||||| || | || | || || | Sbjct 4276 AAAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACC--A 4333 Query 48302 ACTG--GCTTCGTT--GTGTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356 | || ||||| || | | |||| || | ||||||||||| || ||||| | | || Sbjct 4334 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 4393 Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA----------------AGttttt---- 48391 | | |||||||||||| | ||| | ||||| Sbjct 4394 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAAT 4453 Query 48392 ------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 |||| | |||||||| |||||||| ||||| ||| Sbjct 4454 CTAAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATA 4513 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||||| || |||||||||||||| || || |||||||| |||||||| | || |||| Sbjct 4514 CATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGG 4573 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCC 48524 || || || || | ||| |||||| || Sbjct 4574 TATTTGAACTTCTTGAGCAAAACGTTCAACC 4604 >seq27688 Length=2484 Score = 122 bits (134), Expect = 1e-22 Identities = 170/234 (73%), Gaps = 7/234 (3%) Strand=Plus/Minus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||||| || | |||||| |||||||| | |||||| |||||||| | | |||||| Sbjct 392 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 333 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| || Sbjct 332 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 273 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 ||| |||||| |||||||| || || || || ||||| || | || | || || | Sbjct 272 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACC--A 215 Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTT 48350 | || ||||| || | | |||| || | ||||||||||| || |||||| Sbjct 214 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTT 161 >seq13787 Length=5932 Score = 113 bits (124), Expect = 6e-20 Identities = 293/452 (65%), Gaps = 51/452 (11%) Strand=Plus/Plus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| | || | || ||| |||||||| | |||||| |||||||||| | |||||| Sbjct 739 CAAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 798 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||| ||| ||| || || ||||| || ||||| || |||||||| ||||| || Sbjct 799 TTCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 858 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 ||| |||||| |||||||| || || || || ||||| || | || | || || | Sbjct 859 AAAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACC--A 916 Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356 | || ||||| || | | |||| || | ||||||||||| || ||||| | | || Sbjct 917 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 976 Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA---------------AGttttt----- 48391 | | |||||||||||| | ||| | ||||| Sbjct 977 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAA 1036 Query 48392 -------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432 |||| | |||||||| |||||||| ||||| || Sbjct 1037 TTTAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAAT 1096 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 ||||||| || |||||||||||||| || || |||||||| |||||||| | || |||| Sbjct 1097 ACATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTG 1156 Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCC 48524 || || || || | ||| |||||| || Sbjct 1157 GTATTTGAACTTCTTGAGCAAAACGTTCAACC 1188 >seq1624 Length=20192 Score = 113 bits (124), Expect = 6e-20 Identities = 189/273 (69%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| | ||| ||||| || ||||| ||||| ||| | |||||||||| Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || | ||| | ||| | ||||| || ||||| | ||| | || |||||||| ||||| Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 |||| ||| |||| | |||||||| ||||| ||| ||||||||||||| ||| Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047 |||| | | ||||||||| ||||| | ||||||| | ||||| ||||| Sbjct 11813 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 11872 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080 ||||| | |||||| || | |||| ||| Sbjct 11873 AGATATTAAACGATTCTTCATTTGGTCATCCCA 11905 Score = 96.9 bits (106), Expect = 5e-15 Identities = 197/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||||||||| ||||| | || |||| ||||| ||||||||||||| Sbjct 16035 TTATTTCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 16094 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || |||||||||||||||| || || || || ||||| | Sbjct 16095 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGG 16154 Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330 ||||| | || |||||||| ||| || || |||||| ||| ||||| || | ||| | Sbjct 16155 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 16212 Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390 | | || || || || || | | ||| ||| | |||||| ||| | ||| Sbjct 16213 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 16272 Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || || || ||||| || ||||| || || |||||||| Sbjct 16273 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 16321 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || ||||| || || |||||||||||||||||||| || || ||||| || ||| Sbjct 16535 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 16594 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610 ||| ||| | ||| ||| ||| | |||||||| |||||||| | || |||||| || Sbjct 16595 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 16653 Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640 | || ||||||||||| ||||| ||||| Sbjct 16654 ACGATCATAAATAATAACTGAATTGAGTTT 16683 >seq20812 Length=3765 Score = 104 bits (114), Expect = 3e-17 Identities = 187/273 (68%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| | ||| ||||| || || || ||||| ||| | |||||||||| Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || | ||| | ||| | ||||| || ||||| | ||| | || |||||||| ||||| Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 |||| ||| |||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047 |||| | | ||||||||| ||||| | ||||||| | ||||| ||||| Sbjct 968 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 1027 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080 ||||| | |||||| || | |||| ||| Sbjct 1028 AGATATTAAACGATTCTTCATTTGGTCATCCCA 1060 >seq16867 Length=4829 Score = 98.7 bits (108), Expect = 1e-15 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||||||||| ||||| | || |||| ||||| ||||||||||||| Sbjct 278 TTATTTCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 337 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || |||||||||||||||| || || || || ||||| | | Sbjct 338 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 397 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||||| | || |||||||| ||| || || || ||| ||||| || | ||| || Sbjct 398 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTCA 457 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 | || || || || || | | ||| ||| | |||||| ||| | ||| || Sbjct 458 AAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGGA 517 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 | || || || || ||||| || ||||| || || |||||||| Sbjct 518 CGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 564 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || ||||| || || |||||||||||||||||||| || || ||||| || ||| Sbjct 970 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 1029 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610 ||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| || Sbjct 1030 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 1088 Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640 | || |||||||| || ||||| ||||| Sbjct 1089 ACGATCATAAATAATTACTGAATTGAGTTT 1118 >seq9293 Length=8283 Score = 98.7 bits (108), Expect = 1e-15 Identities = 186/273 (68%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| | ||| ||||| || || || ||||| ||| | |||||||||| Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || | ||| | ||| | ||||| || ||||| | ||| | || |||||||| ||||| Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 |||| ||| |||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047 |||| | | |||||| || ||||| | ||||||| | ||||| ||||| Sbjct 5481 TTTGTATAAAGCTTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 5540 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080 ||||| | |||||| || | |||| ||| Sbjct 5541 AGATATTAAACGATTCTTCATTTGGTCATCCCA 5573 >seq490 Length=29575 Score = 98.7 bits (108), Expect = 1e-15 Identities = 186/273 (68%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| | ||| ||||| || || || ||||| ||| | |||||||||| Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || | ||| | ||| | ||||| || ||||| | ||| | || |||||||| ||||| Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 |||| ||| ||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047 |||| | | ||||||||| ||||| | ||||||| | ||||| ||||| Sbjct 534 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 593 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080 ||||| | |||||| || | |||| ||| Sbjct 594 AGATATTAAACGATTCTTCATTTGGTCATCCCA 626 Score = 96.9 bits (106), Expect = 5e-15 Identities = 197/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||||||||| ||||| | || |||| ||||| ||||||||||||| Sbjct 6648 TTATTTCCTCCCTGATCAATATAGCGTGCCACAGAATTAAAAACTTGCAACATTGGAATA 6707 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || |||||||||||||||| || || || || ||||| | | Sbjct 6708 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 6767 Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330 || || | || |||||||| ||| || || |||||| ||| ||||| || | ||| | Sbjct 6768 ATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 6825 Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390 | | || || || || || | | ||| ||| | |||||| ||| | ||| Sbjct 6826 CAAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 6885 Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || || || ||||| || ||||| || || |||||||| Sbjct 6886 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 6934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || ||||| || || |||||||||||||||||||| || || ||||| || ||| Sbjct 7337 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 7396 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610 ||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| || Sbjct 7397 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 7455 Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640 | || |||||||| || ||||| ||||| Sbjct 7456 ACGATCATAAATAATTACTGAATTGAGTTT 7485 >seq30683 Length=2079 Score = 96.9 bits (106), Expect = 5e-15 Identities = 197/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||||||||| ||||| | || |||| ||||| ||||||||||||| Sbjct 617 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 558 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || |||||||||||||||| || || || || ||||| | Sbjct 557 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGG 498 Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330 ||||| | || |||||||| ||| || || |||||| ||| ||||| || | ||| | Sbjct 497 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 440 Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390 | | || || || || || | | ||| ||| | |||||| ||| | ||| Sbjct 439 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 380 Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || || || ||||| || ||||| || || |||||||| Sbjct 379 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 331 >seq8535 Length=8866 Score = 86.0 bits (94), Expect = 9e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353 |||||||||||| || || | ||||| |||| |||||||||| |||||| |||||||| Sbjct 7657 AATTCCCAATTCTTTAACTTCTGTTAAAGATTGCCAATCCATATTAGCAGAACCTAAATA 7716 Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCAC 43400 || |||| ||| || ||||||| ||| |||| | || ||||| Sbjct 7717 AAAATGTTGATTGTCAACAATCCAAAGTTTGCTATGCAAAATTCCAC 7763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694396654814240