Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3049 140 5e-28
seq2786 132 7e-26
seq27688 122 1e-22
seq13787 113 6e-20
seq1624 113 6e-20
seq20812 104 3e-17
seq16867 98.7 1e-15
seq9293 98.7 1e-15
seq490 98.7 1e-15
seq30683 96.9 5e-15
seq8535 86.0 9e-12
>seq3049
Length=15854
Score = 140 bits (154), Expect = 5e-28
Identities = 295/445 (66%), Gaps = 44/445 (10%)
Strand=Plus/Plus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||| | | ||||||
Sbjct 13762 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 13821
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 13822 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 13881
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || |||| | || || |
Sbjct 13882 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACC--A 13939
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 13940 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 13999
Query 48357 GGCATTGTTTCTATAGCATTAAA---------------GAGAAAGttttt---------- 48391
| |||||||||||| | ||| |||||
Sbjct 14000 TCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAG 14059
Query 48392 ------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439
|||| | |||||||| |||||||| ||||| |||||||||
Sbjct 14060 AAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTC 14119
Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499
|| |||||||||||||| || || |||||||| |||||||| | ||||||| || ||
Sbjct 14120 TGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTG 14179
Query 48500 TACCTCCGTACAAAATCGTTCAGCC 48524
|| || | ||| |||||| ||
Sbjct 14180 AACTTCTTGAGCAAAACGTTCAACC 14204
>seq2786
Length=16508
Score = 132 bits (146), Expect = 7e-26
Identities = 297/451 (66%), Gaps = 50/451 (11%)
Strand=Plus/Plus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||||| | ||||||
Sbjct 4156 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 4215
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 4216 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 4275
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| ||||||||||||||| || || || || ||||| || | || | || || |
Sbjct 4276 AAAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACC--A 4333
Query 48302 ACTG--GCTTCGTT--GTGTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 4334 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 4393
Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA----------------AGttttt---- 48391
| | |||||||||||| | ||| | |||||
Sbjct 4394 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAAT 4453
Query 48392 ------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
|||| | |||||||| |||||||| ||||| |||
Sbjct 4454 CTAAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATA 4513
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||||| || |||||||||||||| || || |||||||| |||||||| | || ||||
Sbjct 4514 CATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGG 4573
Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCC 48524
|| || || || | ||| |||||| ||
Sbjct 4574 TATTTGAACTTCTTGAGCAAAACGTTCAACC 4604
>seq27688
Length=2484
Score = 122 bits (134), Expect = 1e-22
Identities = 170/234 (73%), Gaps = 7/234 (3%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||| | | ||||||
Sbjct 392 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 333
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 332 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 273
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || | || | || || |
Sbjct 272 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACC--A 215
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTT 48350
| || ||||| || | | |||| || | ||||||||||| || ||||||
Sbjct 214 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTT 161
>seq13787
Length=5932
Score = 113 bits (124), Expect = 6e-20
Identities = 293/452 (65%), Gaps = 51/452 (11%)
Strand=Plus/Plus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||| | || | || ||| |||||||| | |||||| |||||||||| | ||||||
Sbjct 739 CAAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 798
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| || ||||| || |||||||| ||||| ||
Sbjct 799 TTCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 858
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || | || | || || |
Sbjct 859 AAAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACC--A 916
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 917 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 976
Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA---------------AGttttt----- 48391
| | |||||||||||| | ||| | |||||
Sbjct 977 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAA 1036
Query 48392 -------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432
|||| | |||||||| |||||||| ||||| ||
Sbjct 1037 TTTAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAAT 1096
Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492
||||||| || |||||||||||||| || || |||||||| |||||||| | || ||||
Sbjct 1097 ACATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTG 1156
Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCC 48524
|| || || || | ||| |||||| ||
Sbjct 1157 GTATTTGAACTTCTTGAGCAAAACGTTCAACC 1188
>seq1624
Length=20192
Score = 113 bits (124), Expect = 6e-20
Identities = 189/273 (69%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || ||||| ||||| ||| | ||||||||||
Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| ||||| ||| ||||||||||||| |||
Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 11813 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 11872
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 11873 AGATATTAAACGATTCTTCATTTGGTCATCCCA 11905
Score = 96.9 bits (106), Expect = 5e-15
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 16035 TTATTTCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 16094
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| |
Sbjct 16095 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGG 16154
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
||||| | || |||||||| ||| || || |||||| ||| ||||| || | ||| |
Sbjct 16155 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 16212
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| ||| | |||
Sbjct 16213 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 16272
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 16273 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 16321
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 16535 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 16594
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct 16595 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 16653
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || ||||||||||| ||||| |||||
Sbjct 16654 ACGATCATAAATAATAACTGAATTGAGTTT 16683
>seq20812
Length=3765
Score = 104 bits (114), Expect = 3e-17
Identities = 187/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 968 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 1027
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 1028 AGATATTAAACGATTCTTCATTTGGTCATCCCA 1060
>seq16867
Length=4829
Score = 98.7 bits (108), Expect = 1e-15
Identities = 194/287 (68%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 278 TTATTTCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 337
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| | |
Sbjct 338 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 397
Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332
||||| | || |||||||| ||| || || || ||| ||||| || | ||| ||
Sbjct 398 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTCA 457
Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392
| || || || || || | | ||| ||| | |||||| ||| | ||| ||
Sbjct 458 AAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGGA 517
Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
| || || || || ||||| || ||||| || || ||||||||
Sbjct 518 CGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 564
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 970 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 1029
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 1030 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 1088
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || |||||||| || ||||| |||||
Sbjct 1089 ACGATCATAAATAATTACTGAATTGAGTTT 1118
>seq9293
Length=8283
Score = 98.7 bits (108), Expect = 1e-15
Identities = 186/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | |||||| || ||||| | ||||||| | ||||| |||||
Sbjct 5481 TTTGTATAAAGCTTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 5540
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 5541 AGATATTAAACGATTCTTCATTTGGTCATCCCA 5573
>seq490
Length=29575
Score = 98.7 bits (108), Expect = 1e-15
Identities = 186/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 534 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 593
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 594 AGATATTAAACGATTCTTCATTTGGTCATCCCA 626
Score = 96.9 bits (106), Expect = 5e-15
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 6648 TTATTTCCTCCCTGATCAATATAGCGTGCCACAGAATTAAAAACTTGCAACATTGGAATA 6707
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| | |
Sbjct 6708 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 6767
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
|| || | || |||||||| ||| || || |||||| ||| ||||| || | ||| |
Sbjct 6768 ATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 6825
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| ||| | |||
Sbjct 6826 CAAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 6885
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 6886 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 6934
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 7337 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 7396
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 7397 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 7455
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || |||||||| || ||||| |||||
Sbjct 7456 ACGATCATAAATAATTACTGAATTGAGTTT 7485
>seq30683
Length=2079
Score = 96.9 bits (106), Expect = 5e-15
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 617 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 558
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| |
Sbjct 557 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGG 498
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
||||| | || |||||||| ||| || || |||||| ||| ||||| || | ||| |
Sbjct 497 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 440
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| ||| | |||
Sbjct 439 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 380
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 379 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 331
>seq8535
Length=8866
Score = 86.0 bits (94), Expect = 9e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353
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Sbjct 7657 AATTCCCAATTCTTTAACTTCTGTTAAAGATTGCCAATCCATATTAGCAGAACCTAAATA 7716
Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCAC 43400
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Sbjct 7717 AAAATGTTGATTGTCAACAATCCAAAGTTTGCTATGCAAAATTCCAC 7763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694396654814240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |