Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq19449 122 2e-22 seq695 122 2e-22 seq10902 120 7e-22 seq5142 120 7e-22 seq2634 118 3e-21 seq8650 113 1e-19 seq7966 113 1e-19 seq27424 105 2e-17 seq16244 100 7e-16 seq6254 100 7e-16 seq22378 95.1 3e-14 seq656 95.1 3e-14 seq3965 91.5 4e-13 seq567 84.2 5e-11 >seq19449 Length=4096 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 844 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 903 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 904 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 963 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || ||| | || ||||| Sbjct 964 CGTCTCATCTTCGCAGGGAAGCAGTTGGAGGATGG 998 >seq695 Length=26773 Score = 122 bits (134), Expect = 2e-22 Identities = 173/255 (68%), Gaps = 45/255 (18%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| ||||| || |||||||| || |||||| || || Sbjct 12602 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACCCTAGAAGTGGAAGCGTCTGAT 12661 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct 12662 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 12721 Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058 ||| ||| |||||||| Sbjct 12722 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 12781 Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 || |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || Sbjct 12782 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 12841 Query 178119 CTGCATCTTGTTTTG 178133 || || || |||||| Sbjct 12842 CTTCACCTCGTTTTG 12856 Score = 102 bits (112), Expect = 2e-16 Identities = 172/262 (66%), Gaps = 43/262 (16%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || ||||| || ||||| ||||| || || || ||| Sbjct 12331 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACTCTCGAAGTTGAGGCTTCTGAC 12390 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| || || || |||||| Sbjct 12391 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCGCCTGATCAGCAA 12450 Query 178044 CGACTT-------------------------------------------ATCTTCGCCGG 178060 ||| | ||||| || || Sbjct 12451 CGATTGGTTTTTATTTCCCATTTGTCTAATTTTCAAGCTAAATTTTTAGATCTTTGCTGG 12510 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 |||||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| || Sbjct 12511 TAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCT 12570 Query 178121 GCATCTTGTTTTGAGACTCAGA 178142 |||||||||||| |||| ||| Sbjct 12571 TCATCTTGTTTTGCGACTTAGA 12592 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||| | || || || || ||||||||||| || ||| || ||| Sbjct 12875 CAAATCTTCGTTAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 12934 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 12935 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 12994 Query 178044 CGACT 178048 || || Sbjct 12995 CGTCT 12999 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 12060 CAGATCTTCGTAAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 12119 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 12120 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 12179 Query 178044 CGA 178046 ||| Sbjct 12180 CGA 12182 >seq10902 Length=7311 Score = 120 bits (132), Expect = 7e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 5801 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 5860 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 5861 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 5920 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 || || |||||||| || ||||| | || ||||| | || | ||||| || || Sbjct 5921 CGTCTAATCTTCGCAGGGAAACAATTGGAGGATGGTCGTACGTTGGCCGACTACAA 5976 >seq5142 Length=12213 Score = 120 bits (132), Expect = 7e-22 Identities = 168/247 (68%), Gaps = 43/247 (17%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || ||||| || ||||| ||||| || ||||| || || |||||| || || ||||| Sbjct 7021 TTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCTTCTGATACCATT 6962 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA--- 178046 || |||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 6961 GAAAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATCCCTCCTGATCAGCAACGATTG 6902 Query 178047 --CTT--------------------------------------ATCTTCGCCGGAAAACA 178066 ||| |||||||| || ||||| Sbjct 6901 GTCTTTATTTTCCATTTGTTTAATTCTCAAGTTCAATGTTTAGATCTTCGCTGGCAAACA 6842 Query 178067 GCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCT 178126 ||| || |||||| | |||||||||||||||||| |||| || ||||| || || || || Sbjct 6841 GCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTCTTCACCT 6782 Query 178127 TGTTTTG 178133 |||||| Sbjct 6781 CGTTTTG 6775 Score = 109 bits (120), Expect = 1e-18 Identities = 170/255 (67%), Gaps = 40/255 (16%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct 7295 CAGATTTTTGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 7236 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || |||||| Sbjct 7235 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 7176 Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063 ||| | ||||| || || || Sbjct 7175 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 7116 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| || || Sbjct 7115 ACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 7056 Query 178124 TCTTGTTTTGAGACT 178138 |||||||||| |||| Sbjct 7055 TCTTGTTTTGCGACT 7041 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 7566 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 7507 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 7506 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 7447 Query 178044 CGA 178046 ||| Sbjct 7446 CGA 7444 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || || || ||| Sbjct 6756 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAGGCATCTGAC 6697 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || ||||||||||| ||||| || || || || ||||| Sbjct 6696 ACTATAGAAAATGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCACCAGATCAGCAG 6637 Query 178044 CGACT 178048 || || Sbjct 6636 CGTCT 6632 >seq2634 Length=16880 Score = 118 bits (130), Expect = 3e-21 Identities = 172/255 (67%), Gaps = 45/255 (18%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| ||||| || ||||| || || |||||| || || Sbjct 1487 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCGTCTGAT 1428 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct 1427 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 1368 Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058 ||| ||| |||||||| Sbjct 1367 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 1308 Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 || |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || Sbjct 1307 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 1248 Query 178119 CTGCATCTTGTTTTG 178133 || || || |||||| Sbjct 1247 CTTCACCTCGTTTTG 1233 Score = 113 bits (124), Expect = 1e-19 Identities = 171/255 (67%), Gaps = 40/255 (16%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct 1755 CAGATTTTTGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 1696 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || |||||| Sbjct 1695 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 1636 Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063 ||| | ||||| || || || Sbjct 1635 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 1576 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || || Sbjct 1575 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 1516 Query 178124 TCTTGTTTTGAGACT 178138 |||||||||| |||| Sbjct 1515 TCTTGTTTTGCGACT 1501 Score = 104 bits (114), Expect = 6e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || ||| || ||| Sbjct 1214 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 1155 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 1154 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 1095 Query 178044 CGACT 178048 || || Sbjct 1094 CGTCT 1090 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 2026 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 1967 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 1966 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 1907 Query 178044 CGA 178046 ||| Sbjct 1906 CGA 1904 >seq8650 Length=8768 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 4509 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 4568 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 4569 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 4628 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 4629 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 4663 Score = 89.7 bits (98), Expect = 1e-12 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010 || ||||||||| | || ||||| || ||||||||||| || ||||| ||||| Sbjct 4915 AAGACGATCACCTTGGATGTGGAGCAGTCGGACACCATCGAAAATGTCAAGGCCAAGATC 4974 Query 178011 CAGGACAAAGAAGGAATCCCTCCGGA-CCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069 ||||| || || || ||||| ||||| ||||||||| || |||||||| || || || | Sbjct 4975 CAGGAGAAGGAGGGGATCCCCCCGGAGCCAGCAACGTCTCATCTTCGCAGGGAAGCAATT 5034 Query 178070 CGAAGATGG 178078 || ||||| Sbjct 5035 GGAGGATGG 5043 >seq7966 Length=9287 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 5334 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 5275 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 5274 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 5215 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 5214 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 5180 >seq27424 Length=2520 Score = 105 bits (116), Expect = 2e-17 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 550 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 491 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC--GGACCAGC 178041 |||||||| || ||||| ||||| ||||| || || || ||||| || ||| |||| Sbjct 490 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCCGGGAGCAGC 431 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 |||| || |||||||| || || || | || ||||| Sbjct 430 AACGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 394 >seq16244 Length=5026 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | | || || || ||||||||||| || ||| || ||| Sbjct 137 CAAATCTTCGTGAAAACTTTGAATGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 196 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 197 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 256 Query 178044 CGACT 178048 || || Sbjct 257 CGTCT 261 Score = 89.7 bits (98), Expect = 1e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| || |||||||| || |||||| | |||||||||||||||||| |||| || Sbjct 35 ATCTTCGCTGGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAG 94 Query 178110 GAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || |||||| Sbjct 95 GAATCGACTCTTCACCTCGTTTTG 118 >seq6254 Length=10896 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||| | || || || || ||||||||||| || ||| || ||| Sbjct 10713 CAAATCTTCGTTAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 10654 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 10653 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 10594 Query 178044 CGACT 178048 || || Sbjct 10593 CGTCT 10589 Score = 89.7 bits (98), Expect = 1e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| || |||||||| || |||||| | |||||||||||||||||| |||| || Sbjct 10815 ATCTTCGCTGGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAG 10756 Query 178110 GAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || |||||| Sbjct 10755 GAATCGACTCTTCACCTCGTTTTG 10732 >seq22378 Length=3416 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||| | || || ||||| ||||| || || |||||| ||| || Sbjct 1930 CAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCGGAT 1871 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| ||| || |||||||||||||| || || || || || ||||| Sbjct 1870 ACTATTGAGAACGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 1811 Query 178044 CGACT 178048 || || Sbjct 1810 CGTCT 1806 >seq656 Length=27225 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 1945 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 1886 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 1885 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 1826 Query 178044 CGACT 178048 || || Sbjct 1825 CGTCT 1821 >seq3965 Length=13966 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||| | || || ||||| ||||| || || |||||| ||| || Sbjct 1670 CAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCGGAT 1611 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| || |||||||||||||| || || || || || ||||| Sbjct 1610 ACTATTGAGAATGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 1551 Query 178044 CGACT 178048 || || Sbjct 1550 CGTCT 1546 >seq567 Length=28520 Score = 84.2 bits (92), Expect = 5e-11 Identities = 162/251 (65%), Gaps = 41/251 (16%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | ||||| || || ||||| |||||||| || || || Sbjct 7063 CAAATTTTCGTTAAGACGTTGACAGGCAAGACTATCACTCTCGAGGTTGAGGCATCGGAT 7122 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| || ||||| |||||||| || || || || |||||||| Sbjct 7123 ACGATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAGGGGATTCCGCCAGACCAGCAG 7182 Query 178044 CGACTT-----------------------------------------ATCTTCGCCGGAA 178062 || ||| |||||||| || | Sbjct 7183 CGTCTTGTTTGTTTGCCCTGTCTAATTCTGACTTTTCATGTTTTTAGATCTTCGCTGGTA 7242 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 ||||||||||||| || | || ||||| || || ||| | ||||| || || ||||| | Sbjct 7243 AACAGCTCGAAGACGGTCGTACCCTTGCAGACTACAACATTCAAAAGGAGTCTACACTCC 7302 Query 178123 ATCTTGTTTTG 178133 ||||||||||| Sbjct 7303 ATCTTGTTTTG 7313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203247833837154