Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq19449 122 2e-22
seq695 122 2e-22
seq10902 120 7e-22
seq5142 120 7e-22
seq2634 118 3e-21
seq8650 113 1e-19
seq7966 113 1e-19
seq27424 105 2e-17
seq16244 100 7e-16
seq6254 100 7e-16
seq22378 95.1 3e-14
seq656 95.1 3e-14
seq3965 91.5 4e-13
seq567 84.2 5e-11
>seq19449
Length=4096
Score = 122 bits (134), Expect = 2e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 844 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 903
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 904 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 963
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || ||| | || |||||
Sbjct 964 CGTCTCATCTTCGCAGGGAAGCAGTTGGAGGATGG 998
>seq695
Length=26773
Score = 122 bits (134), Expect = 2e-22
Identities = 173/255 (68%), Gaps = 45/255 (18%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| ||||| || |||||||| || |||||| || ||
Sbjct 12602 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACCCTAGAAGTGGAAGCGTCTGAT 12661
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||
Sbjct 12662 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 12721
Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058
||| ||| ||||||||
Sbjct 12722 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 12781
Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118
|| |||||||| || |||||| | |||||||||||||||||| |||| || ||||| ||
Sbjct 12782 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 12841
Query 178119 CTGCATCTTGTTTTG 178133
|| || || ||||||
Sbjct 12842 CTTCACCTCGTTTTG 12856
Score = 102 bits (112), Expect = 2e-16
Identities = 172/262 (66%), Gaps = 43/262 (16%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || ||||| || ||||| ||||| || || || |||
Sbjct 12331 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACTCTCGAAGTTGAGGCTTCTGAC 12390
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| || || || ||||||
Sbjct 12391 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCGCCTGATCAGCAA 12450
Query 178044 CGACTT-------------------------------------------ATCTTCGCCGG 178060
||| | ||||| || ||
Sbjct 12451 CGATTGGTTTTTATTTCCCATTTGTCTAATTTTCAAGCTAAATTTTTAGATCTTTGCTGG 12510
Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120
|||||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| ||
Sbjct 12511 TAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCT 12570
Query 178121 GCATCTTGTTTTGAGACTCAGA 178142
|||||||||||| |||| |||
Sbjct 12571 TCATCTTGTTTTGCGACTTAGA 12592
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || || || ||||||||||| || ||| || |||
Sbjct 12875 CAAATCTTCGTTAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 12934
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 12935 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 12994
Query 178044 CGACT 178048
|| ||
Sbjct 12995 CGTCT 12999
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 12060 CAGATCTTCGTAAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 12119
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 12120 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 12179
Query 178044 CGA 178046
|||
Sbjct 12180 CGA 12182
>seq10902
Length=7311
Score = 120 bits (132), Expect = 7e-22
Identities = 132/176 (75%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 5801 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 5860
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 5861 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 5920
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
|| || |||||||| || ||||| | || ||||| | || | ||||| || ||
Sbjct 5921 CGTCTAATCTTCGCAGGGAAACAATTGGAGGATGGTCGTACGTTGGCCGACTACAA 5976
>seq5142
Length=12213
Score = 120 bits (132), Expect = 7e-22
Identities = 168/247 (68%), Gaps = 43/247 (17%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|| ||||| || ||||| ||||| || ||||| || || |||||| || || |||||
Sbjct 7021 TTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCTTCTGATACCATT 6962
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA--- 178046
|| |||||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct 6961 GAAAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATCCCTCCTGATCAGCAACGATTG 6902
Query 178047 --CTT--------------------------------------ATCTTCGCCGGAAAACA 178066
||| |||||||| || |||||
Sbjct 6901 GTCTTTATTTTCCATTTGTTTAATTCTCAAGTTCAATGTTTAGATCTTCGCTGGCAAACA 6842
Query 178067 GCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCT 178126
||| || |||||| | |||||||||||||||||| |||| || ||||| || || || ||
Sbjct 6841 GCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTCTTCACCT 6782
Query 178127 TGTTTTG 178133
||||||
Sbjct 6781 CGTTTTG 6775
Score = 109 bits (120), Expect = 1e-18
Identities = 170/255 (67%), Gaps = 40/255 (16%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||||| || ||||| || ||||| ||||| || ||| || |||
Sbjct 7295 CAGATTTTTGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 7236
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || ||||||
Sbjct 7235 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 7176
Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063
||| | ||||| || || ||
Sbjct 7175 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 7116
Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| || ||
Sbjct 7115 ACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 7056
Query 178124 TCTTGTTTTGAGACT 178138
|||||||||| ||||
Sbjct 7055 TCTTGTTTTGCGACT 7041
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 7566 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 7507
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 7506 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 7447
Query 178044 CGA 178046
|||
Sbjct 7446 CGA 7444
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || || || |||
Sbjct 6756 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAGGCATCTGAC 6697
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || ||||||||||| ||||| || || || || |||||
Sbjct 6696 ACTATAGAAAATGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCACCAGATCAGCAG 6637
Query 178044 CGACT 178048
|| ||
Sbjct 6636 CGTCT 6632
>seq2634
Length=16880
Score = 118 bits (130), Expect = 3e-21
Identities = 172/255 (67%), Gaps = 45/255 (18%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| ||||| || ||||| || || |||||| || ||
Sbjct 1487 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCGTCTGAT 1428
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||
Sbjct 1427 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 1368
Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058
||| ||| ||||||||
Sbjct 1367 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 1308
Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118
|| |||||||| || |||||| | |||||||||||||||||| |||| || ||||| ||
Sbjct 1307 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 1248
Query 178119 CTGCATCTTGTTTTG 178133
|| || || ||||||
Sbjct 1247 CTTCACCTCGTTTTG 1233
Score = 113 bits (124), Expect = 1e-19
Identities = 171/255 (67%), Gaps = 40/255 (16%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||||| || ||||| || ||||| ||||| || ||| || |||
Sbjct 1755 CAGATTTTTGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 1696
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || ||||||
Sbjct 1695 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 1636
Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063
||| | ||||| || || ||
Sbjct 1635 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 1576
Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || ||
Sbjct 1575 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 1516
Query 178124 TCTTGTTTTGAGACT 178138
|||||||||| ||||
Sbjct 1515 TCTTGTTTTGCGACT 1501
Score = 104 bits (114), Expect = 6e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || ||| || |||
Sbjct 1214 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 1155
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 1154 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 1095
Query 178044 CGACT 178048
|| ||
Sbjct 1094 CGTCT 1090
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 2026 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 1967
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 1966 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 1907
Query 178044 CGA 178046
|||
Sbjct 1906 CGA 1904
>seq8650
Length=8768
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 4509 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 4568
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 4569 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 4628
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 4629 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 4663
Score = 89.7 bits (98), Expect = 1e-12
Identities = 98/129 (76%), Gaps = 1/129 (1%)
Strand=Plus/Plus
Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010
|| ||||||||| | || ||||| || ||||||||||| || ||||| |||||
Sbjct 4915 AAGACGATCACCTTGGATGTGGAGCAGTCGGACACCATCGAAAATGTCAAGGCCAAGATC 4974
Query 178011 CAGGACAAAGAAGGAATCCCTCCGGA-CCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069
||||| || || || ||||| ||||| ||||||||| || |||||||| || || || |
Sbjct 4975 CAGGAGAAGGAGGGGATCCCCCCGGAGCCAGCAACGTCTCATCTTCGCAGGGAAGCAATT 5034
Query 178070 CGAAGATGG 178078
|| |||||
Sbjct 5035 GGAGGATGG 5043
>seq7966
Length=9287
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 5334 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 5275
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 5274 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 5215
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 5214 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 5180
>seq27424
Length=2520
Score = 105 bits (116), Expect = 2e-17
Identities = 118/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 550 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 491
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC--GGACCAGC 178041
|||||||| || ||||| ||||| ||||| || || || ||||| || ||| ||||
Sbjct 490 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCCGGGAGCAGC 431
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|||| || |||||||| || || || | || |||||
Sbjct 430 AACGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 394
>seq16244
Length=5026
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | | || || || ||||||||||| || ||| || |||
Sbjct 137 CAAATCTTCGTGAAAACTTTGAATGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 196
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 197 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 256
Query 178044 CGACT 178048
|| ||
Sbjct 257 CGTCT 261
Score = 89.7 bits (98), Expect = 1e-12
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|||||||| || |||||||| || |||||| | |||||||||||||||||| |||| ||
Sbjct 35 ATCTTCGCTGGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAG 94
Query 178110 GAATCAACACTGCATCTTGTTTTG 178133
||||| || || || || ||||||
Sbjct 95 GAATCGACTCTTCACCTCGTTTTG 118
>seq6254
Length=10896
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || || || ||||||||||| || ||| || |||
Sbjct 10713 CAAATCTTCGTTAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 10654
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 10653 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 10594
Query 178044 CGACT 178048
|| ||
Sbjct 10593 CGTCT 10589
Score = 89.7 bits (98), Expect = 1e-12
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|||||||| || |||||||| || |||||| | |||||||||||||||||| |||| ||
Sbjct 10815 ATCTTCGCTGGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAG 10756
Query 178110 GAATCAACACTGCATCTTGTTTTG 178133
||||| || || || || ||||||
Sbjct 10755 GAATCGACTCTTCACCTCGTTTTG 10732
>seq22378
Length=3416
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || |||||| | || || ||||| ||||| || || |||||| ||| ||
Sbjct 1930 CAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCGGAT 1871
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| ||| || |||||||||||||| || || || || || |||||
Sbjct 1870 ACTATTGAGAACGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 1811
Query 178044 CGACT 178048
|| ||
Sbjct 1810 CGTCT 1806
>seq656
Length=27225
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 1945 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 1886
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 1885 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 1826
Query 178044 CGACT 178048
|| ||
Sbjct 1825 CGTCT 1821
>seq3965
Length=13966
Score = 91.5 bits (100), Expect = 4e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || |||||| | || || ||||| ||||| || || |||||| ||| ||
Sbjct 1670 CAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCGGAT 1611
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || ||| || |||||||||||||| || || || || || |||||
Sbjct 1610 ACTATTGAGAATGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 1551
Query 178044 CGACT 178048
|| ||
Sbjct 1550 CGTCT 1546
>seq567
Length=28520
Score = 84.2 bits (92), Expect = 5e-11
Identities = 162/251 (65%), Gaps = 41/251 (16%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | ||||| || || ||||| |||||||| || || ||
Sbjct 7063 CAAATTTTCGTTAAGACGTTGACAGGCAAGACTATCACTCTCGAGGTTGAGGCATCGGAT 7122
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| || ||||| |||||||| || || || || ||||||||
Sbjct 7123 ACGATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAGGGGATTCCGCCAGACCAGCAG 7182
Query 178044 CGACTT-----------------------------------------ATCTTCGCCGGAA 178062
|| ||| |||||||| || |
Sbjct 7183 CGTCTTGTTTGTTTGCCCTGTCTAATTCTGACTTTTCATGTTTTTAGATCTTCGCTGGTA 7242
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
||||||||||||| || | || ||||| || || ||| | ||||| || || ||||| |
Sbjct 7243 AACAGCTCGAAGACGGTCGTACCCTTGCAGACTACAACATTCAAAAGGAGTCTACACTCC 7302
Query 178123 ATCTTGTTTTG 178133
|||||||||||
Sbjct 7303 ATCTTGTTTTG 7313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203247833837154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |