Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2449 98.7 8e-16 >seq2449 Length=712056 Score = 98.7 bits (108), Expect = 8e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||||||| ||||| ||||| | || || | || || || ||||| Sbjct 481508 TCCTTCTGGATATTGTAATCCGACAACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAG 481567 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 || || ||||||||||| | || | ||||| || || ||| ||| | | ||||| | Sbjct 481568 ATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTC-CTGAATCTTCGCCTTGACATT 481626 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| ||||||| || || || || | || || || || ||||| ||||| ||||| Sbjct 481627 CTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCAC 481686 Query 43098 AAAAATTTGCATT 43110 ||||| |||||| Sbjct 481687 GAAAATCTGCATT 481699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381314456816112