Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2449 150 4e-31 >seq2449 Length=712056 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| ||||| ||||| || || || | || | ||| ||| Sbjct 481487 AGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGACAACGTACGACCATCT 481546 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||||||||| |||| || ||||||||| ||||| |||||||| || ||| Sbjct 481547 TCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTCC 481606 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | || ||| | |||||| || || || || ||| Sbjct 481607 TGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTC 481666 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || || ||||||||| Sbjct 481667 TTCCCGGTCAGAGTCTTCACGAAAATCTGCATT 481699 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || || || || | || ||||||||| || || ||||| || || ||||||||||| || Sbjct 483662 CCTGCGAAGATCAACCGCTGTTGATCCGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCC 483721 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | ||| || | || || || || || || ||||| |||||||| Sbjct 483722 TTCACATTCTCAATGGTGTCAGACGCCTCAACTTCGAGGGTGATCGTCTTTCCAGTAAGC 483781 Query 104540 GTTTTTACAAATATCTGCATTTTG 104563 ||||| ||||| || ||||||||| Sbjct 483782 GTTTTAACAAAAATTTGCATTTTG 483805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151223378807712