Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2880 89.7 6e-13 seq10797 86.0 8e-12 >seq2880 Length=552878 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 ||| ||| || || ||||||| ||| |||||||||||||| ||||||||||| || Sbjct 482853 TCTCTAATGTAGGTCTCGATCAGTTTACTGTACATTTCCGAATGGATGTTTTCAATTGCA 482912 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || |||||||||||||| | | ||||| | || ||| |||||| | | || ||||| Sbjct 482913 ATTTGAAATCCGTAGAAGAAACGGGCCTCCGGAACCTGCACTTCTTGAGAGAAACGTTC 482971 >seq10797 Length=109758 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 63972 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 |||| |||||| | || ||||| || |||| || || || || || || ||||||||| Sbjct 8338 GTTTTCTTGTGCAAGTTCGATACTGCGATTCGCGCAGCAAGGATAGCGTAGTCCGGATGT 8397 Query 64032 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACT 64091 ||||| || | || || |||| ||||| ||| |||| || || || || | ||| Sbjct 8398 TGTGTGGTCATTGAAGCAGCAGTTTCAGCTGCGAGATTGTCTAACTCAACGGTGGACACT 8457 Query 64092 CCATTATATATTCCTTGAATAACCTTCATAGC 64123 || ||||| | ||| |||||| |||||||| Sbjct 8458 CCTTTATACAGACCTCCAATAACTTTCATAGC 8489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622854816930240