Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2449 98.7 9e-16 >seq2449 Length=712056 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || | ||| | || || ||||| || || |||||||| | Sbjct 481472 CCTCCGCGAAGACGGAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGAC 481531 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || |||||||| || || ||||||| ||||| || || ||||| Sbjct 481532 AACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGA 481591 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || ||| ||||| | ||| | || |||| | || | Sbjct 481592 ATTCCTTCCTTGTCCTGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACT 481651 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || |||||||||||||| Sbjct 481652 TCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 481698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471942800501760