Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2449 114 1e-20 >seq2449 Length=712056 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || |||||| ||||||| || | ||||| | ||||| || | || Sbjct 481699 AATGCAGATTTTCGTGAAGACTCTGACCGGGAAGACAATCACTCTGGAAGTAGAAGCATC 481640 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || ||| | ||| | || | ||| ||||| ||||| ||||| || || | Sbjct 481639 CGACACAATTGAGAATGTCAAGGCGAAGATTCAG-GACAAGGAAGGAATTCCTCCAGATC 481581 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||||||| | || ||||| || || || | ||||||| ||| || || ||||||| Sbjct 481580 AACAGCGGTTAATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGTACGTTGTCGGATTACA 481521 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 |||| || || ||||| || || ||| | || || | || | |||||||| Sbjct 481520 ATATCCAGAAGGAATCAACTCTTCATCTTGTTCTCCGTCTTCGCGGAGGAAA 481469 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| | || || ||| ||||||| ||||||| || | ||| Sbjct 483428 ATGCAAATTTTTGTAAAGACCCTTACGGGGAAAACCATCACGCTCGAAGTCGAAGCATCT 483369 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| |||| |||||| ||||||||||| ||||| || ||||| Sbjct 483368 GACACAATCGAGAATGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCTCCAGACCAG 483309 Query 25119 CAGCGGATTATTTTTGCCGG 25138 || || | |||||||| || Sbjct 483308 CAACGATTGATTTTTGCAGG 483289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433265344021160