Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2449 113 4e-20 >seq2449 Length=712056 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || ||||| || || || |||||||| || |||||| |||||| Sbjct 481489 AACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGACAACGTACGACCATCTTC 481548 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || || || ||||| |||| | |||||||| || |||||||| ||||| ||||| Sbjct 481549 GAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTG 481608 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| || | | |||| ||||||| | ||| || |||| || | || || Sbjct 481609 AATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTCTT 481668 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||||||| || || ||||||||||| Sbjct 481669 CCCGGTCAGAGTCTTCACGAAAATCTGCAT 481698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420073651716768