Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2449 123 2e-23 >seq2449 Length=712056 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || || |||||||| | | || || | ||| Sbjct 481487 AGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGACAACGTACGACCATCT 481546 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || | |||||| || || |||||||||||||| || || Sbjct 481547 TCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTCC 481606 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | ||| || || || ||||| | ||| | ||| Sbjct 481607 TGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTC 481666 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||||| ||| || |||||||| |||||| Sbjct 481667 TTCCCGGTCAGAGTCTTCACGAAAATCTGCATT 481699 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| | || |||||||| ||||||||||||||||| ||||| | |||| || Sbjct 483289 CCTGCAAAAATCAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGA-TTTTGGC 483347 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| ||| ||| | ||| ||| || || ||||| | || | ||| || || || | Sbjct 483348 TTTCACATTCTCGATTGTGTCAGATGCTTCGACTTCGAGCGTGATGGTTTTCCCCGTAAG 483407 Query 64423 AGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||||||||| Sbjct 483408 GGTCTTTACAAAAATTTGCAT 483428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499570702676160