Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2449 89.7 6e-13 >seq2449 Length=712056 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| || || | || || | || ||||||||||| || || || Sbjct 481508 TCCTTCTGGATATTGTAATCCGACAACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAG 481567 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || || ||||| || || | || | | ||||||||| |||||| ||||| || Sbjct 481568 ATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGAATCTTCGCCTTGACATTC 481627 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | ||| || |||| ||||| || || || ||||| || || || Sbjct 481628 TCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCACG 481687 Query 46583 AAGATTTGCATT 46594 || || |||||| Sbjct 481688 AAAATCTGCATT 481699 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 46454 CCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC 46513 || ||||| ||||| ||||| || || | ||| | | |||||||||| |||||| | Sbjct 483662 CCTGCGAAGATCAACCGCTGTTGATCCGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCC 483721 Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 || | || | | ||||| || || || || | ||||| || || || || ||| Sbjct 483722 TTCACATTCTCAATGGTGTCAGACGCCTCAACTTCGAGGGTGATCGTCTTTCCAGTAAGC 483781 Query 46574 GTTTTAACAAAGATTTGCATTTTGC 46598 ||||||||||| ||||||||||||| Sbjct 483782 GTTTTAACAAAAATTTGCATTTTGC 483806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565154575145280