Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2044 84.2 1e-11 >seq2044 Length=4727 Score = 84.2 bits (92), Expect = 1e-11 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 34842 CCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT 34901 ||||| || || || || ||||| ||| | || | ||||||||||| |||||| | Sbjct 181 CCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTAGCT 122 Query 34902 TTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGA 34959 || || || || || | || ||| ||||| |||| ||| || ||||| ||||||| Sbjct 121 TTCAC--ATTCTCGATTGTGTCCGAGGCTTCAACCTCGAGGGTAATTGTTTTCCCCGTGA 64 Query 34960 GAGTCTTCACAAAGATCTGCAT 34981 |||||||||| ||||| ||||| Sbjct 63 GAGTCTTCACGAAGATTTGCAT 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324586660416192