Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2449 127 2e-24 >seq2449 Length=712056 Score = 127 bits (140), Expect = 2e-24 Identities = 172/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || || ||||||||||| || Sbjct 481698 ATGCAGATTTTCGTGAAGACTCTGACCGGGAAGACAATCACTCTGGAAGTAGAAGCATCC 481639 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| |||||||| ||||| |||||| Sbjct 481638 GACACAATTGAGAATGTCAAGGCGAAGATTCAGGACAAGGAAGGAATTCCTCCAGATCAA 481579 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || || |||||||| || || ||||| || ||| | | |||| ||||| || Sbjct 481578 CAGCGGTTAATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGTACGTTGTCGGATTACAAT 481519 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 || || |||||||| || || || | || | || | ||||||| | |||||| || Sbjct 481518 ATCCAGAAGGAATCAACTCTTCATCTTGTTCTCCGTCTTCGCGGAG--GAAACTGAACC 481462 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || ||||| || ||||||||||| ||||| | Sbjct 483428 ATGCAAATTTTTGTAAAGACCCTTACGGGGAAAACCATCACGCTCGAAGTCGAAGCATCT 483369 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| || |||||||||||||||||||| ||||| || || Sbjct 483368 GACACAATCGAGAATGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCTCCAGACCAG 483309 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||| ||||| ||||| || Sbjct 483308 CAACGATTGATTTTTGCAGG 483289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449830880185920