Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2449 178 3e-39 >seq2449 Length=712056 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| ||||| | || ||||| ||||| ||||| ||||| ||||| || Sbjct 481472 CCTCCGCGAAGACGGAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGAC 481531 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| ||||| || || |||||||||||||||| | |||||||||||||| Sbjct 481532 AACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGA 481591 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| ||||| || || | ||||||| Sbjct 481592 ATTCCTTCCTTGTCCTGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACT 481651 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| ||| || ||||| || |||| ||||| || || ||||||||| Sbjct 481652 TCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATT 481699 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 || ||||| || | || ||| || |||||||| |||||||| || ||||| || || ||| Sbjct 483289 CCTGCAAAAATCAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGATTTTGGCT 483348 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| || || || ||| | ||| ||||| | || || || || || || | Sbjct 483349 TTCACATTCTCGATTGTGTCAGATGCTTCGACTTCGAGCGTGATGGTTTTCCCCGTAAGG 483408 Query 82791 GTCTTTACAAATATCTGCAT 82810 ||||||||||| || ||||| Sbjct 483409 GTCTTTACAAAAATTTGCAT 483428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981677954901896