Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2044 91.5 1e-13 >seq2044 Length=4727 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||||||| | || |||||||| ||||| || || | ||||| || || ||||| Sbjct 183 TACCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTAG 124 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 ||||| | || | ||||| | ||||||||| || || || || | ||| ||||| | Sbjct 123 CTTTCACATTCTCGATTGTGTCCGAGGCTTCAACCTCGAGGGTAATTGTTTTCCCCGTGA 64 Query 27226 GAGTTTTCACAAAGATTTGCATAGCTGCTAAAAA 27259 |||| ||||| ||||||||||| || |||||| Sbjct 63 GAGTCTTCACGAAGATTTGCATTACT--TAAAAA 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424872957672768