Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2449 87.8 1e-12 >seq2449 Length=712056 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||| ||||| ||||| || || || ||||| || Sbjct 481472 CCTCCGCGAAGACGGAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGAC 481531 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| || || || || ||||| ||||| |||||||| || || || Sbjct 481532 AACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGA 481591 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657 | ||| |||||||| ||||| | || || | ||||||||| ||| || | Sbjct 481592 ATTCCTTCCTTGTCCTGAATCTTC-GCCTTGACATTCTCAATTGTGTCGGATGCT-TCTA 481649 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || ||||| | || ||||| ||||||||||| Sbjct 481650 CTTCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 481698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314684092460312