Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2449 132 1e-25 seq2044 105 2e-17 >seq2449 Length=712056 Score = 132 bits (146), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| |||||||||||||| || || || ||||| |||||||| | || || | ||||| Sbjct 481486 GAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGACAACGTACGACCATC 481545 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || || ||||| | || ||| || || | | ||||||||||| Sbjct 481546 TTCGAGCTGCTTT--CCAGCAAAGATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTG 481603 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || |||||| |||| | |||| || |||||||| ||||| || Sbjct 481604 TCCTGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATT 481663 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || |||||||||||||| | ||||||| Sbjct 481664 GTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATT 481699 >seq2044 Length=4727 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 ||||||||||| || | |||||| || | | |||||| ||||| |||||||| || | Sbjct 181 CCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTAGCT 122 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || ||| |||| | |||| || || || || || ||||| ||||| ||||||||| Sbjct 121 TTCACATTCTCGATTGTGTCCGAGGCTTCAACCTCGAGGGTAATTGTTTTCCCCGTGAGA 62 Query 152085 GTCTTCACGAAGACCTGCATT 152105 ||||||||||||| |||||| Sbjct 61 GTCTTCACGAAGATTTGCATT 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153645410584744