Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2449 107 1e-18 seq2044 98.7 7e-16 >seq2449 Length=712056 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| ||||| |||||||| | | || | || || Sbjct 481490 ACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGACAACGTACGACCATCTTCG 481549 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| || ||||| ||||||| ||| | |||||||| ||| Sbjct 481550 AGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGA 481609 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| | ||| || |||| || || ||||| Sbjct 481610 ATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTACTTCCAGAGTGATTGTCTTC 481669 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||||||||| || ||||| Sbjct 481670 CCGGTCAGAGTCTTCACGAAAATCTGCAT 481698 >seq2044 Length=4727 Score = 98.7 bits (108), Expect = 7e-16 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| ||||||| |||||||||||||| || | || ||||| || ||||| || Sbjct 181 CCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTA-GC 123 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||| | || ||| ||||| | ||||| || || |||||||| Sbjct 122 TTTCACATTCTCGATTGTGTCCGAGGCTTCAACCTCGAGGGTAATTGTTTTCCCCGTGAG 63 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 |||||||||||||||||||| Sbjct 62 AGTCTTCACGAAGATTTGCAT 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359938348088088