Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2449 84.2 2e-11 >seq2449 Length=712056 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || || |||||||| || || || || || Sbjct 481472 CCTCCGCGAAGACGGAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCCGAC 481531 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || ||||||||||| || || || || | |||||||| || | ||| Sbjct 481532 AACGTACGACCATCTTCGAGCTGCTTTCCAGCAAAGATTAACCGCTGTTGATCTGGAGGA 481591 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| | || | ||| | | | |||||| | || || Sbjct 481592 ATTCCTTCCTTGTCC-TGAATCTTCGCCTTGACATTCTCAATTGTGTCGGATGCTTCTAC 481650 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| ||||| |||||||||||||| Sbjct 481651 TTCCAGAGTGATTGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 481698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462235440316800