Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq636 93.3 5e-14 >seq636 Length=76548 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 53086 ATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATT 53145 ||| || |||||||||| ||| || ||| |||| || | | || ||||||||||| Sbjct 18592 ATTTTTCATCTCATCATCCCACAAGTTTAACTCGACCAAGTCCTTCAGCAGATGCGGATT 18651 Query 53146 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 53205 || | ||| || || ||||| | ||||| ||| |||| || || || || || || Sbjct 18652 GACAATTTGGAAGTCACCAGAAAGCACTCTTCGACTGTAGATGTTCGAAGTGTAAGGCTC 18711 Query 53206 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 53265 | ||||| || || || | ||||||||| || || || || ||||| || ||||| | Sbjct 18712 AATGGACTCGTTGTTGCCGAGAATTTGAGCGGTGGACGCCGTTGGCATTGGGGCCACTAG 18771 Query 53266 TAAACTATT 53274 ||||| || Sbjct 18772 CAAACTGTT 18780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593503592850000