Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq17 82.4 5e-11 >seq17 Length=262609 Score = 82.4 bits (90), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 34250 CCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGC 34309 ||||| |||||||| ||||||||||| || | | ||||||||| ||||| Sbjct 68141 CCTGCAAAAATGAGTCGCTGCTGGTCAGGTGGTATTCCCTCCTTGTCTTGGATCTTCGCT 68082 Query 34310 TTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGA 34369 |||| || | |||| || | || ||| || || | ||||||||| || || ||||| Sbjct 68081 TTTACATTTTCAATCGTGTCAGACGCTTCAACCTCAAGCGTGATGGTCTTTCCAGTGAGT 68022 Query 34370 GTTTTCACAAAGATCTGCAT 34389 ||||||||||| || ||||| Sbjct 68021 GTTTTCACAAAAATTTGCAT 68002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322956337700000