Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2779 91.5 1e-13 >seq2779 Length=25375 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 |||||||| ||||| ||||| || || ||||| | ||||||||| ||| || || | Sbjct 20765 CCGGCGAAGATCAATCGCTGCTGATCTGGAGGGATACCCTCCTTATCCTGGATCTTGGCC 20824 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 || || | | | |||| |||||||||| | ||| || || |||||||| ||| Sbjct 20825 TTGACATTCTCGATCGTGTCGGAGGCCTCCACCTCGAGGGTGATGGTTTTGCCCGTGAGA 20884 Query 45317 GTCTTCACAAAGATTTGCAT 45336 |||||||| ||||||||||| Sbjct 20885 GTCTTCACGAAGATTTGCAT 20904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394933759991875