Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq636 96.9 5e-15 >seq636 Length=76548 Score = 96.9 bits (106), Expect = 5e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 65090 AATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTC 65149 ||| ||||| | | ||| || | | ||| || |||||||||| ||| || ||| ||| Sbjct 18565 AATTGATCCGCTGTTTGCGATCAGCTGATTTTTCATCTCATCATCCCACAAGTTTAACTC 18624 Query 65150 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCG 65209 | || | | || ||||||||||| || | ||| || || ||||| | ||||| || Sbjct 18625 GACCAAGTCCTTCAGCAGATGCGGATTGACAATTTGGAAGTCACCAGAAAGCACTCTTCG 18684 Query 65210 AGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGT 65269 | |||| || || || || || || | ||||| || || || | ||||||||| || Sbjct 18685 ACTGTAGATGTTCGAAGTGTAAGGCTCAATGGACTCGTTGTTGCCGAGAATTTGAGCGGT 18744 Query 65270 TGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 65305 || || || ||||| || ||||| | ||||| || Sbjct 18745 GGACGCCGTTGGCATTGGGGCCACTAGCAAACTGTT 18780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657931127175000