Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq20723 84.2 2e-11 >seq20723 Length=1367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 131095 CCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC 131154 || ||| |||| || |||||||| || || |||||||| || ||||| ||| || | Sbjct 166 CCGGCGAAGATCAATCGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCC 107 Query 131155 TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGA 131214 |||| | || | ||||||| || ||| | |||| ||| | || || || || || Sbjct 106 TTGACATTTTCGATTGTATCGGAGGCCTCAACCTCGAGGGTGATTGTCTTTCCTGTGAGG 47 Query 131215 GTTTTTACGAAAATCTGCATGACT 131238 ||||| ||||||||||||||| || Sbjct 46 GTTTTGACGAAAATCTGCATGCCT 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471839482800000