Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2624 82.4 6e-11 >seq2624 Length=26635 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 16796 CCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGC 16855 || |||||||||| ||||| || || || | || || ||||| || || | Sbjct 21715 CCGGCATAAATAATTCGCTGCTGATCGGGCGGAATCCCTTCCTTGTCTTGAACTTTCAAT 21774 Query 16856 TTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGC 16915 ||||| | ||||||||||| ||||||| ||| | ||||| || |||||||| || Sbjct 21775 TTCACATTTTCCACAGTGTCGACGGGCTCGAGTTCGAGTGTGATTGTCTTTCCGGTGAGA 21834 Query 16916 GTTTTGACAAAAATCTGCAT 16935 ||||||||||||| |||||| Sbjct 21835 GTTTTGACAAAAACCTGCAT 21854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404942975331250