Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq636 96.9 3e-15 >seq636 Length=76548 Score = 96.9 bits (106), Expect = 3e-15 Identities = 187/276 (68%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 93937 TCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTC 93996 || || || |||||| |||| | | | || || ||| | ||||| | |||| | Sbjct 21454 TCGTCATGCTTCCTGCTGACCATGAGTGAGGATTCGATCGCTGGAATCTATGACACGTTG 21395 Query 93997 AAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA 94056 ||| | ||||| ||||| || || || || ||||| | | ||| || | | Sbjct 21394 AAGCAGTGTGCCCTGATCTCGAAGAGTGCCGGAGGCATCGGCCTAAATGTTCATAAGATT 21335 Query 94057 CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATG 94116 ||||||| ||| || | || ||| || || |||||||||||||| || | |||||| Sbjct 21334 CGTGCCACGGGATCGTTAATTGCCGGAACGAACGGCACCTCCAACGGTCTGATTCCTATG 21275 Query 94117 CTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGT 94176 || || |||| ||| ||| | || || || ||||| ||||| ||| | ||| ||| Sbjct 21274 CTTCGCGTCTACAATAACACTGCTCGTTATGTGGATCAGGGCGGTAACAAGAGACCGGGA 21215 Query 94177 TCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGAC 94212 | || ||| ||||| | ||||| ||||| || ||| Sbjct 21214 GCGTTTGCGATCTATTTGGAGCCGTGGCATGCTGAC 21179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494541543825000