Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2779 93.3 5e-14 >seq2779 Length=25375 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 46454 CCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC 46513 |||||||| ||||| |||||||| || | || | | |||||| ||| |||||| | Sbjct 20765 CCGGCGAAGATCAATCGCTGCTGATCTGGAGGGATACCCTCCTTATCCTGGATCTTGGCC 20824 Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 |||| || | | ||||||| | ||||| || | ||||||||||||||||| || Sbjct 20825 TTGACATTCTCGATCGTGTCGGAGGCCTCCACCTCGAGGGTGATGGTTTTGCCCGTGAGA 20884 Query 46574 GTTTTAACAAAGATTTGCATT 46594 || || || |||||||||||| Sbjct 20885 GTCTTCACGAAGATTTGCATT 20905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565030851525000