Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq19468 392 4e-104 seq87 167 3e-36 seq17 147 3e-30 seq20723 141 1e-28 seq7726 141 1e-28 seq28266 132 6e-26 seq2779 125 9e-24 seq199 100 4e-16 seq12672 98.7 1e-15 seq2624 93.3 6e-14 >seq19468 Length=1528 Score = 392 bits (434), Expect = 4e-104 Identities = 708/1021 (69%), Gaps = 22/1021 (2%) Strand=Plus/Minus Query 195707 GATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGAC 195766 ||||| || || ||||| || |||||||||| || || ||||| || || || |||||| Sbjct 1294 GATGCCGTCGTCACTGTGCCAGCTTACTTCAACGACTCCCAACGTCAAGCCACCAAGGAC 1235 Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 |||| || ||||| ||||| ||| ||| | || |||||||| || || || ||||| Sbjct 1234 GCTGGAGCAATTGCCGGTCTCAACGTTCTCCGTATCATCAATGAGCCTACTGCCGCTGCT 1175 Query 195827 ATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTC 195886 || || || || || ||||| || || ||| |||||| | ||||| ||||| Sbjct 1174 ATCGCCTACGGACTCGACAAAAAGGGTACCGGAGAGCGAAATGTGCTCATCTTCGATCTT 1115 Query 195887 GGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAG 195946 || |||||||| || ||||| || | || | || |||| ||| || |||||||||||| Sbjct 1114 GGAGGTGGTACCTTCGATGTGTCTATCCTGACCATCGAAGATGGAATTTTCGAAGTAAAG 1055 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCAT 196006 | || ||||| || || ||||| || || || || |||||| || | || || Sbjct 1054 TCCACCGCTGGAGACACCCATCTCGGAGGAGAGGACTTCGATAACCGAATGGTCAACCAC 995 Query 196007 TTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGA----AATCCTAGGGC 196062 || || |||||| || ||| | ||||| || ||| | || ||| | || Sbjct 994 TTCGTTGCCGAGTTCAAGCGCAAGCACAAGAAGGA----CCTGAACACCAACCCTCGTGC 939 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 ||| || || ||| | || ||||| ||||||||||| || ||||| ||||| | |||| Sbjct 938 TCTCCGCCGTCTTCGTACCGCATGCGAACGTGCCAAGCGTACTCTATCTTCCTCATCTCA 879 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCG 196182 | | | ||||||| || || | || || || || |||||||| || | || ||||| Sbjct 878 AGCTTCGATTGAGATCGACTCACTTTTCGAGGGTATCGACTTCTACACTAACATCACCCG 819 Query 196183 TGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACA 196242 ||| ||||| || ||| | | | || ||||| | | ||||| || |||| | | Sbjct 818 TGCCCGTTTCGAGGAGCTGTGCGCCGACTTGTTCCGTTCGACCATGGACCCCGTTG-AGA 760 Query 196243 AGT-ACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 ||| || | || || |||||||| ||| |||| | || || ||||| || |||| Sbjct 759 AGTCTCTGAGAGATGCCAAGATGGACAAGAGCCAGGTACACGACATCGTCCTGGTCGGAG 700 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCT-TCTTCAATAATAAAGAT 196360 |||| |||||||| |||||| | || || | || || || | | ||| | || || Sbjct 699 GATCTACCCGTATCCCGAAGGTGCAGAAGCTTCTCTC-AGATCTGTTCTCTGGAAAGGAA 641 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 || ||||| |||||||||| ||||| || ||||| || || || || || ||||| ||| Sbjct 640 TTGAACAAGTCGATCAACCCTGATGAGGCCGTTGCCTACGGAGCAGCTGTCCAGGCCGCT 581 Query 196421 ATTCTCTCAGGTGTTGACAA-TAATAA--CGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 ||||| || || ||||| | || ||| |||||||| || || || || || || Sbjct 580 ATTCTTTCCGG---AGACAAGTCGGAAGCCGTGCAAGATCTGCTTCTCCTCGACGTCGCC 524 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || ||| |||| || || || ||||| |||||| | || | || ||| Sbjct 523 CCGCTCTCGCTCGGTATTGAGACCGCTGGAGGTGTCATGACTGCCTTGATCAAGAGAAAC 464 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGG 196596 || ||||| ||||| ||| | | | || | || | || || ||||| || || || || Sbjct 463 ACCACTATCCCGACCAAG-ACCAGCCAGACATTCACCACCTACTCCGACAACCAGCCTGG 405 Query 196597 TGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTG 196655 ||| || || || | |||||||| || | | || | ||||| ||| |||| || | Sbjct 404 TGTATTGATCCAGGTCTTCGAAGGAGAGCG-TGCGATGACCAAGGACAACAATCTGCTCG 346 Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715 ||| ||||| || | || |||||| | ||||| |||| ||||| |||||| | || | Sbjct 345 GAAAGTTCGAACTGTCCGGAATTCCACCAGCACCACGAGGAGTTCCCCAGATTGAGGTGT 286 Query 196716 G 196716 | Sbjct 285 G 285 >seq87 Length=164798 Score = 167 bits (184), Expect = 3e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 195620 AAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCG 195679 ||| | || ||||| ||||| ||||| | |||||||||| ||||||||||| | ||| Sbjct 36473 AAAGAGTTCGCTCCGGAAGAGATTTCTGCAATGGTGTTGACGAAGATGAAGGAAATTGCC 36532 Query 195680 GAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGT 195739 ||||| | | || || |||||| | ||||| || ||||| || || ||||| | | Sbjct 36533 GAATCATATCTTGGCAAGGAGGTGAAACACGCAGTCGTCACTGTTCCGGCCTACTTTAAT 36592 Query 195740 GATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAG 195798 ||| | |||||||| || || ||||| |||| ||||||| || ||||| ||| || | Sbjct 36593 GATGCTCAACGACAAGCCACGAAGGATGCTGGAACTATTGCTGGCCTAAA-TGTGGTTCG 36651 Query 195799 AATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| ||||| || || || |||||||||||||| |||||| |||||||||| Sbjct 36652 AATCATCAACGAGCCCACCGCGGCTGCAATTGCCTATGGTTTGGACAAGAA 36702 >seq17 Length=262609 Score = 147 bits (162), Expect = 3e-30 Identities = 119/144 (83%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || |||||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct 66019 AGAATGCAAATTTTTGTGAAAACCCTTACTGGAAAGACTATCACGCTTGAGGTTGAAGCC 66078 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || ||||| || || || | || || ||||| ||||| |||||||| |||||||| ||| Sbjct 66079 TCTGACACGATTGAAAATGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCACCGGAT 66138 Query 171979 CAGCAACGACTTATTTTTGCTGGT 172002 ||||| ||||| || ||||| ||| Sbjct 66139 CAGCAGCGACTCATCTTTGCAGGT 66162 Score = 134 bits (148), Expect = 2e-26 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || ||||| || ||||| || ||||| ||| | || Sbjct 68608 ATGCAGATCTTTGTGAAGACCCTGACCGGAAAGACGATCACGCTTGAGGTGGAGGCTTCG 68667 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| |||| || |||| |||||||| ||||| |||||||| ||||| || |||||| Sbjct 68668 GACACCGTCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGATCAG 68727 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 || || || || |||||||||| Sbjct 68728 CAGCGTCTCATCTTTGCTGGTA 68749 Score = 132 bits (146), Expect = 6e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||||||||| || |||||||| || ||||| || |||||||| |||| Sbjct 68002 ATGCAAATTTTTGTGAAAACACTCACTGGAAAGACCATCACGCTTGAGGTTGAAGCGTCT 68061 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct 68062 GACACGATTGAAAATGTAAAAGCGAAGATCCAAGACAAGGAGGGAATACCACCTGACCAG 68121 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||||| |||||||| ||| Sbjct 68122 CAGCGACTCATTTTTGCAGGT 68142 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || |||||||| || || || ||||| ||||| ||||| ||||| | || Sbjct 66320 ATGCAGATTTTCGTGAAAACTCTCACCGGGAAAACGATCACACTCGAAGTTGAAGCCTCC 66379 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| | || | ||||| ||||| |||||||| |||||||| |||||| Sbjct 66380 GACACAATCGAAAACGTAAAGTCTAAGATCCAAGACAAGGAAGGAATTCCACCAGATCAG 66439 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || |||| || ||||| ||| Sbjct 66440 CAGAGACTCATCTTTGCCGGT 66460 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || ||||| || || | ||||| ||||| || || | ||||| ||| |||| Sbjct 68286 ATGCAGATTTTTGTCAAGACATTGACTGGGAAAACAATAACGTTGGAGGTGGAGGCGTCG 68345 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| || ||||||||||||||||| |||||||| || || Sbjct 68346 GACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCACCTGACCAA 68405 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || || |||||||||||| Sbjct 68406 CAGCGGCTCATTTTTGCTGGT 68426 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| ||||| ||||| ||||| || || || || || | || Sbjct 66603 ATGCAAATTTTCGTCAAAACTCTTACCGGAAAGACTATTACGCTGGAAGTAGAAGCTTCT 66662 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || ||||| || ||||||||||| ||||| || || || Sbjct 66663 GATACTATTGAAAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCTCCAGACCAA 66722 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||||| || ||||||||| Sbjct 66723 CAGCGACTCATCTTTGCTGGT 66743 >seq20723 Length=1367 Score = 141 bits (156), Expect = 1e-28 Identities = 117/143 (82%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||| || || || ||||| || ||||||||||| ||||| | || Sbjct 323 ATGCAGATATTCGTGAAGACGCTCACCGGAAAGACCATCACCCTCGAAGTTGAAGCTTCC 382 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || ||||||| |||||||| || |||||||| || ||||| |||||| Sbjct 383 GACACAATCGAAAATGTCAAAGCGAAGATTCAGGACAAGGAAGGAATCCCACCAGATCAG 442 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 |||||| | || ||||||||||| Sbjct 443 CAACGATTGATCTTTGCTGGTAA 465 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || |||||||| || ||||| || |||||||||||||||||| | || Sbjct 27 ATGCAGATTTTCGTCAAAACCCTCACAGGAAAGACAATCACCCTCGAGGTTGAGGCCTCC 86 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || |||||||| || |||| |||||||| || || ||||| || || ||||| |||||| Sbjct 87 GATACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGATCAG 146 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||| | || || || ||| Sbjct 147 CAGCGATTGATCTTCGCCGGT 167 >seq7726 Length=8395 Score = 141 bits (156), Expect = 1e-28 Identities = 117/143 (82%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||| || || || ||||| || ||||||||||| ||||| | || Sbjct 4686 ATGCAGATATTCGTGAAGACGCTCACCGGAAAGACCATCACCCTCGAAGTTGAAGCTTCC 4745 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || ||||||| |||||||| || |||||||| || ||||| |||||| Sbjct 4746 GACACAATCGAAAATGTCAAAGCGAAGATTCAGGACAAGGAAGGAATCCCACCAGATCAG 4805 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 |||||| | || ||||||||||| Sbjct 4806 CAACGATTGATCTTTGCTGGTAA 4828 Score = 138 bits (152), Expect = 1e-27 Identities = 115/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| ||||| ||||| |||||||| ||||| || | || Sbjct 4092 ATGCAGATCTTCGTGAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTCGAAGCTTCG 4151 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || ||||||||||||| ||||| |||||||| || ||||| |||||| Sbjct 4152 GACACGATTGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAG 4211 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||||| | || ||||| ||| Sbjct 4212 CAACGGTTGATCTTTGCCGGT 4232 Score = 132 bits (146), Expect = 6e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || ||||| || ||||| || ||||| || ||||| ||||| |||||| | || Sbjct 3497 ATGCAGATTTTTGTCAAGACCCTCACCGGAAAGACCATCACGCTCGAAGTTGAGGCCTCC 3556 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || |||| || ||||| || || |||||||| |||||||| ||||| Sbjct 3557 GACACAATCGAAAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAA 3616 Query 171982 CAACGACTTATTTTTGCTGGT 172002 |||||| | ||||| |||||| Sbjct 3617 CAACGATTGATTTTCGCTGGT 3637 Score = 132 bits (146), Expect = 6e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| ||||| ||||| |||||||| || || || | || Sbjct 3793 ATGCAGATCTTCGTGAAAACCCTCACTGGGAAAACCATCACCCTTGAAGTCGAAGCTTCG 3852 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||||||||||||||| || |||||||| || ||||| |||||| Sbjct 3853 GACACGATTGAGAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCTGATCAG 3912 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||| || | || || |||||| Sbjct 3913 CAAAGATTGATCTTCGCTGGT 3933 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || || || |||||||| || ||||||||| | ||| Sbjct 2605 ATGCAAATCTTCGTCAAGACTCTCACCGGGAAGACTATCACACTTGAGGTTGAGGCTTCA 2664 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | ||||| ||||| || || |||||||| || ||||| || ||| Sbjct 2665 GACACCATTGAGAACGTTAAAGCTAAGATCCAGGACAAGGAAGGAATCCCACCAGACCAG 2724 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || ||||| || || || ||||| Sbjct 2725 CAGCGACTGATCTTCGCAGGTAA 2747 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || |||||||| || ||||| || |||||||||||||||||| | || Sbjct 4388 ATGCAGATTTTCGTCAAAACCCTCACAGGAAAGACGATCACCCTCGAGGTTGAGGCCTCC 4447 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || | || || ||||| || || |||||||| || ||||| |||||| Sbjct 4448 GATACGATCGAAAATGTTAAGGCAAAGATCCAGGACAAGGAAGGAATCCCACCAGATCAG 4507 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||| | || ||||||||| Sbjct 4508 CAGCGATTGATCTTTGCTGGT 4528 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || || || || || |||||||| ||||||||||| || | || Sbjct 2308 ATGCAGATTTTCGTAAAGACGCTAACAGGCAAAACTATTACCCTCGAGGTGGAAGCTTCT 2367 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | ||||| || |||||||| ||||| || || |||||||||||| Sbjct 2368 GATACCATTGAGAATGTGAAAGCTAAAATTCAAGACAAGGAGGGAATCCCACCCGATCAG 2427 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||| |||| || || || ||| Sbjct 2428 CAAAGACTGATCTTCGCAGGT 2448 Score = 86.0 bits (94), Expect = 8e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 ||||| | || |||||||| |||||||||||||| || | || |||||| | || |||| Sbjct 3399 TTTTTTCAGGAAAACAGCTCGAAGATGGACGTACTCTTTCCGACTACAACATCCAGAAGG 3458 Query 172052 AGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||||||||| || || ||||| | || || ||||| Sbjct 3459 AGTCTACTCTTCATCTCGTTCTTCGCCTCCGTGGTGG 3495 >seq28266 Length=552 Score = 132 bits (146), Expect = 6e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| ||||| ||||| |||||||| || || || | || Sbjct 185 ATGCAGATCTTCGTGAAAACCCTCACTGGGAAAACCATCACCCTTGAAGTCGAAGCTTCG 244 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||||||||||||||| || |||||||| || ||||| |||||| Sbjct 245 GACACGATTGAGAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCTGATCAG 304 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||| || | || || |||||| Sbjct 305 CAAAGATTGATCTTCGCTGGT 325 >seq2779 Length=25375 Score = 125 bits (138), Expect = 9e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| || || || || ||||| |||||||||||||| ||| | || Sbjct 20904 ATGCAAATCTTCGTGAAGACTCTCACGGGCAAAACCATCACCCTCGAGGTGGAGGCCTCC 20845 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || |||||||| || || || || |||||| Sbjct 20844 GACACGATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATCCCTCCAGATCAG 20785 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 || ||| | || || || |||| Sbjct 20784 CAGCGATTGATCTTCGCCGGTA 20763 >seq199 Length=130249 Score = 100 bits (110), Expect = 4e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| || || ||||||| | ||||||||||||| ||| ||||| | | | Sbjct 23852 CCTGAAGAGATCTCTGCTATGGTTCTCGGAAAGATGAAGGAGATTGCCGAATCGTACCTT 23911 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || || || | || || || ||||| || |||||||||| ||| | || || Sbjct 23912 GGAAAGGAAGTCAAGCACGCCGTGGTCACTGTTCCCGCTTACTTCAACGATGCCCAGAGA 23971 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || ||||| || | | ||||| || || ||| | |||||||||| || Sbjct 23972 CAGGCTACCAAGGATGCCGGAACCATTGCTGGCCTCAACGTGGTGCGAATTATCAACGAG 24031 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||||| || || || || || || ||||| || ||||| Sbjct 24032 CCAACCGCTGCCGCTATCGCCTACGGTCTCGATAAGAA 24069 >seq12672 Length=3626 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTC-GTC 171920 ||||| | || || ||||| || || ||||| |||||||| ||||| || ||| | ||| Sbjct 2997 ATGCAGGTTTTCGTCAAAACTCTCACCGGAAAGACTATCACACTCGAAGTCGAGCCCGTC 2938 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||||| | || || | ||| || ||||||| |||||||| ||||| |||||||| Sbjct 2937 -GACACTGTGGAAAATGTGAAATTGAAAGTTCAAGACAAGGAAGGGATTCCGCCCGATCA 2879 Query 171981 GCAACGACTTATTTTTGCTGGTA 172003 ||| ||| |||||| ||| |||| Sbjct 2878 GCAGCGAATTATTTATGCCGGTA 2856 >seq2624 Length=26635 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTC-GTC 171920 ||||| | ||||| ||||| || || ||||| || ||||| ||||| | ||| | ||| Sbjct 21854 ATGCAGGTTTTTGTCAAAACTCTCACCGGAAAGACAATCACACTCGAACTCGAGCCCGTC 21795 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||||| | || || | ||| || ||||||| |||||||| ||||| |||||||| Sbjct 21794 -GACACTGTGGAAAATGTGAAATTGAAAGTTCAAGACAAGGAAGGGATTCCGCCCGATCA 21736 Query 171981 GCAACGACTTATTTTTGCTGGTA 172003 ||| ||| |||||| ||| |||| Sbjct 21735 GCAGCGAATTATTTATGCCGGTA 21713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657620841150000