Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq20723 91.5 3e-13 seq7726 91.5 3e-13 >seq20723 Length=1367 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 206308 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 |||||||| | ||||||||| | || ||||||||||||||| ||||||| || |||||| Sbjct 528 GGAAAGCAACTCGAAGATGGACGCACATTGGCCGATTACAACATCCAGAAGGAATCTACT 587 Query 206368 CTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||| | | ||||| Sbjct 588 CTTCACCTTGTTCTCCGCCTTCG 610 >seq7726 Length=8395 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 206308 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 |||||||| | ||||||||| | || ||||||||||||||| ||||||| || |||||| Sbjct 4891 GGAAAGCAACTCGAAGATGGACGCACATTGGCCGATTACAACATCCAGAAGGAATCTACT 4950 Query 206368 CTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||| | | ||||| Sbjct 4951 CTTCACCTTGTTCTCCGCCTTCG 4973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181376001429375