Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq17 84.2 2e-11 >seq17 Length=262609 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 35591 TGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATC 35650 |||| ||| ||||| || | |||||||| |||| |||| | |||||||| |||| Sbjct 66167 TGCTAACCTGCAAAGATGAGTCGCTGCTGATCCGGTGGAATACCTTCCTTGTCTTGGATC 66108 Query 35651 TTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCC 35710 || ||| | | || | | |||||| | ||| ||||| | |||||| || || || Sbjct 66107 TTAGCCTTTACATTTTCAATCGTGTCAGAGGCTTCAACCTCAAGCGTGATAGTCTTTCCA 66048 Query 35711 GTCAAAGTTTTCACAAATATCTGCATTCTGTGCGCACA 35748 || | ||||||||||| || |||||||| ||||| || Sbjct 66047 GTAAGGGTTTTCACAAAAATTTGCATTCT-TGCGCGCA 66011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450628074225000