Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2779 86.0 5e-12 >seq2779 Length=25375 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||||||| | || | ||||| ||||| || || | |||||| ||||| ||||||| Sbjct 20763 TACCGGCGAAGATCAATCGCTGCTGATCTGGAGGGATACCCTCCTTATCCTGGATCTTGG 20822 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 || | | || | ||||| | ||| || || || || || || | ||||||||| | Sbjct 20823 CCTTGACATTCTCGATCGTGTCGGAGGCCTCCACCTCGAGGGTGATGGTTTTGCCCGTGA 20882 Query 27226 GAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| ||||||||||| Sbjct 20883 GAGTCTTCACGAAGATTTGCAT 20904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424782270165000