Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq636 111 2e-19 >seq636 Length=76548 Score = 111 bits (122), Expect = 2e-19 Identities = 190/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 79477 ATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCC 79536 ||||| || ||||||||||||| |||||| || |||| ||| | |||| |||||| Sbjct 21177 ATGTCAGCATGCCACGGCTCCAAATAGATCGCAAACGCTCCCGGTCTCTTGTTACCGCCC 21236 Query 79537 TGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCG 79596 || | || || || || ||||| ||| | || || ||||| || | | |||| || | Sbjct 21237 TGATCCACATAACGAGCAGTGTTATTGTAGACGCGAAGCATAGGAATCAGACCGTTGGAG 21296 Query 79597 ACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT-CGAGCAGTGGATTCC 79655 ||||||||| ||| ||| | || | || ||||| || || || | | || Sbjct 21297 GTGCCGTTCGTTCCGGCAATTAACGATCCCGTGGCACGAATCTTATGAACA-TTTAGGCC 21355 Query 79656 GATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC 79715 |||||| |||| | ||| ||||| | || |||| ||| | ||| || ||||| || | Sbjct 21356 GATGCCTCCGGCACTCTTCGAGATCAGGGCACACTGCTTCAACGTGTCATAGATTCCAGC 21415 Query 79716 GATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 |||||| || || |||| | | ||||||||| Sbjct 21416 GATCGAATCCTCACTCATGGTCAGCAGGAAGCA 21448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548323388550000