Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq17 86.0 4e-12 >seq17 Length=262609 Score = 86.0 bits (94), Expect = 4e-12 Identities = 108/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 34566 ACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG 34625 ||| ||||| || | ||||||||||| || || | ||| ||||| ||| ||| ||||| Sbjct 68426 ACCAGCAAAAATGAGCCGCTGTTGGTCAGGTGGAATTCCTTCCTTATCT-TGAATTTTTG 68368 Query 34626 TTTTAACGATAA-AATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683 |||||| | ||| ||||| ||| |||||| |||| ||||| ||||| || || Sbjct 68367 CTTTAACATTCTCAATGGTGTCCGACGC-CTCCACCTCCAACGTTATTGTTTTCCCAGTC 68309 Query 34684 AACGTTTTCACAAAAATCTGCAT 34706 || || || |||||||||||||| Sbjct 68308 AATGTCTTGACAAAAATCTGCAT 68286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314616924344375