Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_006642.1 Length=14286 Score E Sequences producing significant alignments: (Bits) Value seq3051 78.8 8e-11 >seq3051 Length=26940 Score = 78.8 bits (86), Expect = 8e-11 Identities = 94/124 (76%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 13303 GAGGATCG-GACTACATCCACGCGAATTGGATCGATGGCTTTGAAGAGCCGAAGAAGTTC 13361 ||||||| |||||||||||||| || ||||||||||||| ||| |||||||||||| Sbjct 23295 GAGGATCATGACTACATCCACGCTAACTGGATCGATGGCTACCGAGAACCGAAGAAGTTC 23354 Query 13362 ATCGCCACTCAAGGTCCCTTTGCGAACACCACTGCAG-ACTTCTGGAGGCTCGTGTGGCA 13420 ||| ||| || | ||| | || ||| || | ||| | ||||||| | | ||||| Sbjct 23355 ATCCTCACCCAGGCTCCTCTCTCGCACA-CATTCCAGCAATTCTGGACTATGATATGGCA 23413 Query 13421 GGAG 13424 |||| Sbjct 23414 GGAG 23417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 45562923928685