Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq26501 95.1 2e-14 seq63590 89.7 7e-13 >seq26501 Length=6857 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| | |||||| |||||||| || || || | | | ||||| ||||||||||| || Sbjct 2580 ATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGTTTCCACCT 2639 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | ||| | || ||||| || || |||| | |||||||| | || || ||| Sbjct 2640 TGATCAACGTAACGTGCAGTGTTGTTGTACACTCGAAGCATTGGAACCAGGCCGTTTGAT 2699 Query 63293 GTACCATTGGTC 63304 |||||||| ||| Sbjct 2700 GTACCATTTGTC 2711 >seq63590 Length=3081 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| | |||||| |||||||| || || || | | | ||||| ||||||||||| || Sbjct 503 ATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGTTTCCACCT 444 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | ||| | || ||||| || || || | | ||| |||| | ||||| ||| Sbjct 443 TGATCAACGTAACGTGCAGTGTTGTTGTACACGCGAAGCATGGGAACCAAGCCATTCGAT 384 Query 63293 GTACCATTGGTC 63304 |||||||| ||| Sbjct 383 GTACCATTTGTC 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633123074698000