Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq61737 84.2 2e-11 >seq61737 Length=3671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || |||||| || || || | ||| ||||| | |||| ||| |||||||| |||||| Sbjct 2963 CTCACCGGCGAAAATGAGCCTCTGCTGATCGGGTGGAATGCCTTCCTTGTCCTGAATCTT 3022 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | || |||||||| || || | || || ||||||||||| Sbjct 3023 CGCTTTCACATTCTCAATGGTGTCCGACGCCTCGACTTCAAGGGTGATGGTTTTTCCCGT 3082 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || |||||||||||||| Sbjct 3083 CAAGGTCTTCACAAAAATCTGCAT 3106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380639284789365