Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13301 87.8 1e-11 >seq13301 Length=6488 Score = 87.8 bits (96), Expect = 1e-11 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 || || || || |||||||| || ||||||||||| |||| |||| |||||||| || Sbjct 5370 GTATTCGACTGCTGGTTTGAGTCGGGTTCTATGCCATATGCACAAAACCATTATCCATTC 5429 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATAT---TGCAGATTTTATAACAGAA 297438 |||||| |||| || |||| ||||| | | ||| ||||| || ||| Sbjct 5430 GAAAATAA-GAAA----AG---CTTCG-AAGATAACTTCCCTGCTGATTTCATTGGTGAA 5480 Query 297439 TCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTT 297498 ||||||||||||||||| |||||||| ||| | | || ||||| || || | || Sbjct 5481 GGTATTGATCAAACAAGAGGATGGTTTTACACTCTTCTTGTACTTTCAACTGCACTTTTC 5540 Query 297499 AACAAACCAGCATTTAA 297515 || || || ||||||| Sbjct 5541 AATAAGCCTCCATTTAA 5557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265422991284740