Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq26501 87.8 9e-13 seq63590 82.4 4e-11 >seq26501 Length=6857 Score = 87.8 bits (96), Expect = 9e-13 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 26021 TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCT 26080 ||||| ||||||| ||||||||||| |||||||| |||||| ||| || ||| | Sbjct 2574 TCAAAGATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGTTT 2633 Query 26081 CCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAAC 26133 ||||||||||| ||||| | |||||| | ||| | ||| | ||||||||| Sbjct 2634 CCACCTTGATCAACGTAACGTGCAGTGTTGTTGTACACTCGAAGCATTGGAAC 2686 >seq63590 Length=3081 Score = 82.4 bits (90), Expect = 4e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 26021 TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCT 26080 ||||| ||||||| ||||||||||| |||||||| |||||| ||| || ||| | Sbjct 509 TCAAAGATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGTTT 450 Query 26081 CCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140 ||||||||||| ||||| | |||||| | ||| | || | ||| ||||| || ||| Sbjct 449 CCACCTTGATCAACGTAACGTGCAGTGTTGTTGTACACGCGAAGCATGGGAACCAAGCCA 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252841842399125