Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq63590 87.8 2e-12 seq26501 87.8 2e-12 >seq63590 Length=3081 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 19580 CGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639 ||||| || ||| ||| | ||| ||||||| || |||||| | | |||||||||||| Sbjct 616 CGCGATCTTTTCTATGCCCTCTGGGTTCCGGATCTGTTCATGAAAAGAGTTGAGAAGGAC 675 Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCT 19680 ||||| ||| |||||||||| |||||||||||||| || Sbjct 676 GAAGACTGGTCTTTGATGTGCCCACACGAATGCCCTGGTCT 716 >seq26501 Length=6857 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19580 CGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639 ||||| || ||| ||| | ||| ||||||| || |||||| | | ||||| |||||| Sbjct 2466 CGCGATCTTTTCTATGCCCTCTGGGTTCCGGATCTGTTCATGAAAAGAGTTGAAAAGGAC 2407 Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCT 19680 ||||| ||| ||||||||||| |||||||||||||| || Sbjct 2406 GAAGATTGGTCTCTGATGTGCCCACACGAATGCCCTGGTCT 2366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548084231737200