Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq63590 89.7 7e-13 seq26501 89.7 7e-13 >seq63590 Length=3081 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 ||||||||| ||||| | ||||||||||| | |||||||||||| |||||||| | Sbjct 734 TCTCCCCAACATTCATCAAGACCAGGGCATTCGTGTGGGCACATCAAAGACCAGTCTTCG 675 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 || | || ||||| |||||| || ||||| || | ||| || ||| || ||||| || Sbjct 674 TCCTTCTCAACTCTTTTCATGAACAGATCCGGAACCCAGAGGGCATAGAAAAGATCGCG 616 >seq26501 Length=6857 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | ||||| | |||||||||||| | ||| || || | | | ||||||||||| | Sbjct 2572 ACTCAAAGATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGT 2631 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 | || || ||||| | || | || ||||| || || |||| | |||||||| | | Sbjct 2632 TTCCACCTTGATCAACGTAACGTGCAGTGTTGTTGTACACTCGAAGCATTGGAACCAGGC 2691 Query 78217 CGTTAGATGTTCCATTTGT 78235 |||| ||||| |||||||| Sbjct 2692 CGTTTGATGTACCATTTGT 2710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694110850703200