Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq26501 107 3e-18 seq63590 93.3 6e-14 >seq26501 Length=6857 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | ||||| | |||||||||||| | ||| ||||| | | |||| |||||||| | Sbjct 2572 ACTCAAAGATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGT 2631 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||| | || | |||||||| || || |||| | |||||||| | || Sbjct 2632 TTCCACCTTGATCAACGTAACGTGCAGTGTTGTTGTACACTCGAAGCATTGGAACCAGGC 2691 Query 76812 CGTTAGATGTACCATTTGT 76830 |||| |||||||||||||| Sbjct 2692 CGTTTGATGTACCATTTGT 2710 >seq63590 Length=3081 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | ||||| | |||||||||||| | ||| ||||| | | |||| |||||||| | Sbjct 511 ACTCAAAGATATCTGCATGCCATGGTTCCAAATAGATCGCAAAAGCACCAGGTCGTTTGT 452 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||| | || | |||||||| || || || | | ||| |||| | || Sbjct 451 TTCCACCTTGATCAACGTAACGTGCAGTGTTGTTGTACACGCGAAGCATGGGAACCAAGC 392 Query 76812 CGTTAGATGTACCATTTGT 76830 | || |||||||||||||| Sbjct 391 CATTCGATGTACCATTTGT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712361780001600