Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq61737 98.7 2e-15 >seq61737 Length=3671 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||| ||||| ||||| ||||| || | | ||| |||||||| ||||||||||| Sbjct 3278 TTACCGGCAAAGATGAGCCTTTGCTGATCTGGTGGGATGCCTTCCTTGTCTTGAATTTTG 3337 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| |||| | | |||||| ||| ||||| || ||||| || || || || Sbjct 3338 GCTTTCACATTCTCAATAGTATCTGAAGCCTCGACTTCCAGGGTAATGGTCTTTCCAGTA 3397 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 || || |||||||| | |||||| Sbjct 3398 AGTGTTTTCACGAAAATTTGCATT 3421 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 |||||||| || ||||||||||| || | | || |||||||| || ||||| || | Sbjct 2967 CCGGCGAAAATGAGCCTCTGCTGATCGGGTGGAATGCCTTCCTTGTCCTGAATCTTCGCT 3026 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || ||| |||| | | |||| || ||| |||||||| || || ||||| ||||| | Sbjct 3027 TTCACATTCTCAATGGTGTCCGACGCCTCGACTTCAAGGGTGATGGTTTTTCCCGTCAAG 3086 Query 152085 GTCTTCACGAAGACCTGCATT 152105 |||||||| || | ||||||| Sbjct 3087 GTCTTCACAAAAATCTGCATT 3107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152870897195105