Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq968 91.5 1e-13 >seq968 Length=9902 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120 ||| || || || |||||||| ||||| |||||| ||| ||| || ||||| | || Sbjct 4583 CTGGAAGCCGTAAACAGGTCCTAGATCACCTTCAGCTCGATCACTGAAGCCAAGCTGGTC 4642 Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTT 102179 | |||| | ||||||||| ||||||||||| | || || | |||| | ||| Sbjct 4643 GAGAAATTGGCGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATAAATGCTT 4702 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 || | ||| ||||| || ||||| |||| |||||||||||| ||| ||||||| | Sbjct 4703 TG-AATTTGTATCTCCTCGAATGAACCATAACAATTCTTCAACAACGCCTTTCCAAAAGA 4761 Query 102240 CTCTCTTAGTAGTTAAAAGTGG 102261 | | || || || || | ||| Sbjct 4762 CACGTTTGGTTGTCAACACTGG 4783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361050998197472