Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq968 91.5 1e-13
>seq968
Length=9902
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120
||| || || || |||||||| ||||| |||||| ||| ||| || ||||| | ||
Sbjct 4583 CTGGAAGCCGTAAACAGGTCCTAGATCACCTTCAGCTCGATCACTGAAGCCAAGCTGGTC 4642
Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTT 102179
| |||| | ||||||||| ||||||||||| | || || | |||| | |||
Sbjct 4643 GAGAAATTGGCGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATAAATGCTT 4702
Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239
|| | ||| ||||| || ||||| |||| |||||||||||| ||| ||||||| |
Sbjct 4703 TG-AATTTGTATCTCCTCGAATGAACCATAACAATTCTTCAACAACGCCTTTCCAAAAGA 4761
Query 102240 CTCTCTTAGTAGTTAAAAGTGG 102261
| | || || || || | |||
Sbjct 4762 CACGTTTGGTTGTCAACACTGG 4783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361050998197472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |