Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq21486 98.7 1e-15
>seq21486
Length=1089
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| ||||| | ||||| |||||||| || | || || || || |
Sbjct 377 AATGCAAATTTTCGTTAAAACTTTAACGGGTAAAACCATAACGTTGGAAGTGGAGGCTTC 318
Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|| | | | | ||||| | ||| ||| | ||| ||||| |||||||| || | || |
Sbjct 317 GGATACCATCGAAAACGTTAAAGCAAAGA-TTCAGGACAAGGAGGGCATTCCACCAGATC 259
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || ||| | |||| || || ||||| ||||| || | || || || ||||| |
Sbjct 258 AACAGCGATTGATCTTTGCCGGAAAACAACTGGAGGATGGTCGTACGCTGTCGGACTATA 199
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
| ||||||||||| | ||||| || || ||
Sbjct 198 ATATCCAGAAGGAATCGACGCTTCACCTGGT 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514926349406720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |