Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq6796 95.1 1e-14
seq17479 91.5 2e-13
seq40524 89.7 6e-13
>seq6796
Length=2897
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130
|||| ||||||||||||| |||||| | ||||||||||| ||||||||||||||||||
Sbjct 2 CGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTATACTA 61
Query 60131 CCGAGGATTGAA 60142
||||||| ||||
Sbjct 62 CCGAGGACTGAA 73
>seq17479
Length=1317
Score = 91.5 bits (100), Expect = 2e-13
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 1248 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 1307
Query 60126 TACTACCGAG 60135
||||||||||
Sbjct 1308 TACTACCGAG 1317
>seq40524
Length=572
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130
|||| ||||||||||||| |||||| | ||||||||||| ||||||||||||||||||
Sbjct 2 CGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTATACTA 61
Query 60131 CCGAGGA 60137
|||||||
Sbjct 62 CCGAGGA 68
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571492578876160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |