Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq968 87.8 1e-12 >seq968 Length=9902 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 20053 TTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAA 20112 || || || ||||| || ||||||||||||||||||||||| || |||||||| ||| | Sbjct 4777 TTGACAACCAAACGTGTCTTTTGGAAAGGCGTTGTTGAAGAATTGTTATGGTTCATTCGA 4718 Query 20113 GGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTGGAGCGCACAT 20169 ||| |||||||| | ||| | || || ||||| || || |||||| || || Sbjct 4717 GGAGATACAAATTCAA---AGCATTTATCTGATAAAGGTGTCAAAATTTGGGATGCCAAT 4661 Query 20170 GGATCTAAGCAATTT 20184 |||||| |||||| Sbjct 4660 GGATCTCGCCAATTT 4646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398962776219040