Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq968 87.8 1e-12
>seq968
Length=9902
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/135 (75%), Gaps = 6/135 (4%)
Strand=Plus/Minus
Query 20053 TTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAA 20112
|| || || ||||| || ||||||||||||||||||||||| || |||||||| ||| |
Sbjct 4777 TTGACAACCAAACGTGTCTTTTGGAAAGGCGTTGTTGAAGAATTGTTATGGTTCATTCGA 4718
Query 20113 GGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTGGAGCGCACAT 20169
||| |||||||| | ||| | || || ||||| || || |||||| || ||
Sbjct 4717 GGAGATACAAATTCAA---AGCATTTATCTGATAAAGGTGTCAAAATTTGGGATGCCAAT 4661
Query 20170 GGATCTAAGCAATTT 20184
|||||| ||||||
Sbjct 4660 GGATCTCGCCAATTT 4646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398962776219040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |