Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq21486 87.8 1e-12
>seq21486
Length=1089
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155
||||| || || || | ||| |||| |||||| || ||||| || || || || |||||
Sbjct 147 TATCCGCCGCGAAGACGAAGAACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCC 206
Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215
| || || || ||| |||| |||||| || ||| |||| | || ||||||||
Sbjct 207 GACAGCGTACGACCATCCTCCAGTTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGT 266
Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTC 18274
|| | ||| ||||| || ||| | |||||| | | | | | | || || | |||
Sbjct 267 GGAATGCCCTCCTTGTCCTGAATCT-TTGCTTTAACGTTTTCGATGGTATCCGAAGCCTC 325
Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | || ||| |||| || || || ||||| || ||||||||||||
Sbjct 326 CACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTAACGAAAATTTGCATT 377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379133771348640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |