Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26]
45,472 sequences; 86,175,476 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq11331 102 1e-16
seq7536 87.8 3e-12
>seq11331
Length=1923
Score = 102 bits (112), Expect = 1e-16
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 79485
|| ||||| || || ||||| |||||||||||||| || || || | |||||||||||||
Sbjct 191 AGGATAAAAGCATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 132
Query 79486 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545
|| ||| ||||| || | ||||||||||| ||| |||| |||||| | ||| |
Sbjct 131 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAACTTTATTCAAATTTTTA 72
Query 79546 ACTATTACTTT 79556
|| | ||||||
Sbjct 71 ACCACTACTTT 61
>seq7536
Length=2681
Score = 87.8 bits (96), Expect = 3e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 79485
|| ||||| || || |||| || ||||||||||| || || || | |||||| ||||||
Sbjct 1589 AGGATAAAAGCATCAGCTAGGCCCTGAACACCAATGCCAATTGGACGATGTCTATTATTA 1648
Query 79486 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 79541
|| ||| ||||| || | ||||||||||| ||| ||||||||||| | |||
Sbjct 1649 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAATTTTATTCAAATT 1704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717860536014080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |