Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq21486 107 1e-18 >seq21486 Length=1089 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||| || || |||| ||||| | || |||| |||||| |||||||| Sbjct 186 TCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCCTCCAGTTGTTTTCCGGCAAAG 245 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 ||||||||||||||||| | || | || || || || ||| ||| |||| || | Sbjct 246 ATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTC-CTGAATCTTTGCTTTAACGTT 304 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | || || |||||| || || | |||||| ||||| || |||| |||||| || Sbjct 305 TTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTACCCGTTAAAGTTTTAAC 364 Query 43098 AAAAATTTGCATT 43110 |||||||||||| Sbjct 365 GAAAATTTGCATT 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381158248781376