Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq21486 104 2e-17 >seq21486 Length=1089 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||| || ||||| || ||||| || |||| || || | |||||| Sbjct 168 ACCAGGTGAAGCGTCGATTCCTTCTGGATATTATAGTCCGACAGCGTACGACCATCCTCC 227 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 || ||||| || ||| | || | || ||| ||||| || | |||||| ||||| | Sbjct 228 AGTTGTTTTCCGGCAAAGATCAATCGCTGTTGATCTGGTGGAATGCCCTCCTTGTCCTGA 287 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || ||| || | ||| ||||| || |||| ||| | || ||||||||| Sbjct 288 ATCTTTGCTTTAACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAACGTTATGGTTTTA 347 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || ||||||||||| || |||||||||||| Sbjct 348 CCCGTTAAAGTTTTAACGAAAATTTGCATT 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414343047899968